Detail



ID : Ahg345632

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|345632|fgenesh1_pg.C_scaffold_4001974
Sequence
ATGTTGCCTT GGTTGGTCTT ACCTTTGATT GGACTTTGGG CTCTGTCTCA GCTTCTTCCA CCAGCTTTTC GTTTTGAAAT AACATCTCCG AGGCTAGCTT GTGTATTTGT GCTTTTGGTT ACTTTGTTCT GGTACGAGGT TTTGATGCCT CAGCTCTCTA CTTGGCGTGT GCGGAGAAAT GCTAGACTTA GGGAGAGAAA GAGATTGGAA GCTATGGAAC TGCAAAAGCT TAAGAAAACT GCTACACGAC GTTGCCGTAA CTGCTCAACG CCTTACCGGG ACCAAAATCC TGGTGGTGGA AAATTTATGT GCTCATATTG TGGGCATATA TCAAAGAGAC CTGTTTTAGA CATGCCTGTT CCCCCAGGGT TAGGACTTTC TGGTTCTGGA ATATTGAAGG ATCTTGTAGG AAGAGGTGGT AAGATTTTGA ATGGAAAGGG ATGGAATGAG AATGGTTGGA TGCACGGGCA AGAATGGTCA GAAAACAGCA CATGGACTAG CGAGTCAGCC TATTGGCGGA ATCATAGTGG TAGTACATTT GGTGAAGATG AGAATTGCTT GGGGGAAAAA TCATATCCTG GTGGCGTTGT TTTTGCTTGC CGGCTGCTTG CTTCTTTTTT CATGAGCATT AGGTGGCTTT GGAGAAAGAT TTTTAGCTTT AGCTCTTCGG TTGATGAATC GTCAACCGAT GCTGACCAGA GACGATTACT GGCTAGGCAG GGTGAGAATG GGACCAGCTA TCATGAGAGT AGGGTTGAGA AAGCACGCAG AAAAGCCGAG GAGAAAAGAC AAGCTAGGCT GGAAAAGGAG CATTTGGAGG AAGAAGAGAG AAAACAACGA GAGGAAGTCG CGAAACTAGT GGAGGAACGG AGAAAATTAA GAGATGAGAA GATTGAAGCC GAGAGATGCA GCAAAGCATC ATCTGCTTCC AAAGAAAAAG ATACTAAAAG GGGGGCAGAG AAGAAGAGCC AGGAGAGAAA GAAAGAAAGA GATAGAGCCT CTAGTAAGAG CAATTCCGAT GTCGAAGAGC TTGATAAGAG AATAGGAAAA GATACTGACC ATAAGCGTGA GCTTGAGAAA AATGATCATT TTAGGAGCCC CAACATGGAA AAGAGGCACG GGCATAGTGT AGATAATAAT GCTACTAGTA ACAGTAACAT GACAGGTGCT GGTGGTAGGT ACTTTGATCG AGTGAAGGGT ACATTCTTCT CTTCTTCTAA GGCTTTTACA GATAACCGGT TCTTTGGAAG AGGTGTCAAT ATGTCAGCTA CAATTGCAAA AGAGAATAAG CACATCGGTT CTGCAGACCA TTCTCATGCA TCTGCTCATA CTAGGCATAT TAATCCTCCT GAATTTGTTG CTGGAAAATC TGGTTCAAAT GGAGAGGAAA GGAATACTAC TCGTCATGTT GTTTCTGAGC CGCAACCAAG TGGAGAACCT AAAAAATCAT GGCAGCAACT ATTCGCACGT ACGCCATCTG TGCCTGCCTC CTCCAATGTT AATGTTATAA GTCGACCTAG TACAAAGCCC AAAGATGTTC AGAGTTCACA GGTTCCTAAT CAAGATCAGT CAATCCGAAC CTTTGACAAT CCAATCAGTT TTGGGCTCCC ATCACCATTC ACTATACCAA CATATTCTAG CGGATCGACT ATCAGTAGCT TAGGTTTCTC ATCTGCAAGA GATATTGTTC TCCCTCAGCC TGGGGAAAAA GCTCATGCTT TTATGCCTGA AGAAGAGCGT TTTGAAGATC CGTGTTATGT TCCGGATCCA ATATCTCTTC TGGGACCTGT TTCAGAATCG CTTGATCTAA GGGCTGGGTT TGAAACTGGT GGAAGACTGA AAAAACCCCA CTTGTTAAAG AATACACCTT TTTGTGAAGT CAATAAGCCA TCTCCGATAG AATCTCCCTT GTCAAGATTA CGAGTTGCAG ATGAAAAACA AGTTAATGAT GGAAGCTGGC AAATGTGGAA GACCACCTTT GGCCAAGACC TCCTTCTACC TTCAGATAAC ACTAGAGCTA ATGAGGAAAG TGCTGTGCAT CATGTGCCTC ATAATAGGAC ATCATCATTA TTTGCAACAG ATGACCCTAT TCTCAGTGCA TATTCACACA AGAAGGAAAG TTTTGAAAAT GATCAGAGAA GTGGCCCGTT CAGCCCCATT GCTGGTCCAA GCAACCATGA TCCCTGGTCA CAGAAAATGT TCCTCCCAGC ATCATCTGGC ATAGAGAGTC TTTTGTCGCC TAGTAGACCA GAAGATGCCG GCCCGAATAA TGTTGCATAC ATGAGTCCAA CTGGGTTGGC TCCAGAGAAT CCATTTGAAC TCCCTTCTCC GAATCACTGG CTCAAGAAAG TGAAGAAGAC TGGGGATGGG ACTGGGAGGC AATTTGTGGA GGGTCAATTC CTAAACCAAG ATGTACAGTC GTTTTGGTAG 
Length2430
Protein Sequence
Protein Residue
Map Locationscaffold_4: 17733354.. 17736235
Download Sequence
A.thaliana
AGI-codeAT3G51640.1
Description
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
6.48074 Ahg494461 Cyclin family protein
8.94427 Ahg484769 alfin-like 3
14.2478 Ahg488536 SART-1 family
16.7332 Ahg477338 bromodomain and extraterminal domain protein 10
17.7764 Ahg947629 myb family transcription factor
18.5203 Ahg474886 methyltransferases;copper ion binding
21.3542 Ahg488454 Regulator of chromosome condensation (RCC1) family protein
22.9129 Ahg471712 protein-protein interaction regulator family protein
29.1204 Ahg480624 ARID/BRIGHT DNA-binding domain-containing protein
32.4962 Ahg933740 RAP
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression