| Annotation |
|---|
| Description | jgi|Araly1|488536|fgenesh2_kg.6__1670__AT5G16780.1 |
| Sequence |
GCAAAATTGT TCTCCTCTCT TGGCCACCAG AGTCTCTCCG TCTCTTTCCA CGGCGAGTTT GCGATCGTCC GCGGTTTGCT GTTAGTCGTT ATCTCTCTCG CTTGAAGCAT TCCTTTCTAA ATTTCTTGGC AGTTACTAGG GCTTTATCTT CTAAACCTTA CTATTCGTCG TGTGCTTTCG CAGTTTCTCT CTAAACCCTC GGAAAATTTC TCCTGCAATT CTGGGTTCTT TGTCCGTCGA TCCCAATATT GCAGTACTTT CCATTGAAGG CTTGATCTAG AGGTAATTCA TAGGCGTTTT GAAAATGGAA GTGGAGAAGT CTAAATCAAG GCATGAAAGC AGGGAAGAGA GGGCTGACTA CGAGGGTTCG CCTGTTAGAG AACACAGAGA TGGAAGGAGG AAAGAGAAGG ATCATAGGAG CAAGGATAAA GATAAGAACA GGGATAAGGA CCACCGCAGG GATAAGGAGA AAGAGAGAGA CCGAAAAAGA GATAGAGAAG GGGACACTGA CAAGGAGATC TCTAGAGGTA GAGATAAAGA GAGGGAGAAA GATAAGACCA GAGATCGGGT AAAAGAAAAG GAGAAGGAAA AAGAAAGAGA TAGACATAAA GATAGGGAAA ATGAGAGGGA TAGTGAAAAG GAAAAAGACA AGGATCGGTC AAGAGTGAAG GAGAGAGCCA GTAAGAAAAG TCATGAAGAT GATCACGAGA CTCATAAAGC TGCAGAAAGA TATGAACATT TTGACAACAG AGGTCTGAAT GAAGGTGACG ATAATGTTGA TGCTGCATCA AGTGGGAAAG AAGCATCTGC CTTGGAACTT CAGAATCGCA TTTTGAAGAT GAGAGAGGAA AGAAAGAAGA AAGTTGAAGA TGCTTCTGAT GCTTCTGATG CTCTATCATG GGTTGCAAGG AGCCGTAAGA TTGAGGAAAA AAGAAATGCT GAGAAGCAAA GAGCTCAGCA GCTCTCGAGA ATTTTTGAGG AGCAGGACAA TCTTAATCAA GGTGAAAATG AAGATGGCGA GGATGGCGGG CATCTATCTG GTGTTAAAGT TCTACATGGT TTGGATAAAG TGGTGGAAGG TGGAGCAGTT ATCTTGACAC TAAAAGACCA AAGTGTCCTT GCCGATGGTG ACGTTAACAA TGAGATTGAC ATGCTAGAAA ATGTGGAAAT TGGAGAACAG AAGCGTCGGA ATGAAGCTTA TGAAGCAGCC AAGAAGAAAA AGGGAATATA TGATGATAAG TTTAATGATG ATCCCGGGGC AGAAAAGAAG ATGCTTCCGC AGTACGATGA GGCTGCTACT GATGAGGGGA TCTTTTTGGA TGCAAAGGGT CGCTTCACCG GTGAAGCTGA GAAGAAGCTA GAGGAGCTGC GTAAGAGAAT TCAGGGTCAG ACGACAAATA CTTTTGAAGA CCTTAACTCC TCAGCAAAGG TCTCTTCAGA TTACTTCTCA CATGAAGAAA TGCTACGGTT CAAAAAACCC AAGAAAAAGA AACAATTGCG GAAAAAGGAT AAATTGGACT TAAGTGTGCT GGAAGCAGAA GCTGTTGCAT CGGGATTTGG AGCTGAAGAT CTTGGTTCTC GTAAAGATGG CAGAAGGCAG GCCATGAAAG AAGAGAAAGA AAGGAACGAT TATGAAAAAC GGAGCAATGC CTATCAGGAA GCCATTGCTA AAGCTGATGA GGCATCCAGA CTACTCAGAA GGGAACAAGT TCAGCCTATT AAAACAGACG AAGATGAGAG TATGGTGTTG GCCGATGATG CTGAAGATCT TTACAAATCG TTAGAGAAAG CTAGGAGGTT AGCTCTCATT AAGAAAGAGG AAGCTGGATC TGGTCCACAG GCAGTTGCGC ATCTTGTGGC TTCCAGCACC AATCAAACAA CAGATGATAA TAGCACCACC GGGGATGAGA CACAAGAAAA TACCGTGGTT TTTACAGAGA TGGGAGACTT TGTCTGGGGT CTCCAGCGCG AGAAAGATGT GCAAAAGCCT GAAAGCGAAG ATGTTTTCAT GGAAGAAGAT GTAGCACCCA AAGCTCCTGT TGAAGTAAAA GAAGAGCACC CCGATGGTTG GACAGAAGTA AAAGACACTG ATATGGATGC AGCAGAGGAT TCATCAGACA CCAAAGAGAT AACTCCTGAT GAAACTATAC ACGAGGTTGC TGTTGGAAAA GGATTATCTG GTGCATTGAA GCTTCTTAAA GACCGAGGAA CCCTAAAGGA GAAGGTCGAA TGGGGTGGTA GAAATATGGA CAAAAAAAAG AGCAAGCTTG TGGGTATTGT GGATGATGAA GGAGGTAAAG AATCTAAGGA TAGATTCAAG GACATCCGGA TTGAAAGGAC TGACGAGTTT GGTAGAACTT TAACTCCAAA AGAAGCCTTT CGATTACTCT CTCACAAATT CCACGGGAAG GGGCCTGGAA AAATGAAGGA AGAGAAACGT ATGAAACAGT ACCAGGAAGA GCTCAAGTTA AAGCAAATGA AAAATTCAGA CACACCATCT CAATCTGTTC AAAGAATGAG AGAAGCTCAA GCTCAGTTGA AAACTCCTTA CCTTGTCCTC AGTGGCCATG TCAAACCAGG ACAAACTAGT GATCCTCAGA GTGGGTTTGC GACTGTTGAG AAGGATGTTC CTGGAAGCTT AACACCAATG CTTGGGGACA AAAAGGTGGA GCATTTCTTG GGAATAAAGC GGAAATCGGA GCCTGGAAAC TCGGATACAC CACCAAAGAG ACCAAAGCCT TGAAGGACAC TTTTCGATGG ATAATCAAAA GCTCTTACTT GCGTCTTTCC TTGACATTGA TTGGTCTCTG GGAAACTTTT TCTCAGGATT AGTTAGTCTT TAGAAAAAGA CAGCTCGATC AATATATAGA TTCATGCTGA GACTGATGAT ATTTTGCTGA AGTTGCCAAA ACCGGCATGG GTTTGGTTTC AGTTCTGTAA TCAAA |
| Length | 2945 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_6: 6592205.. 6596810 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G16780.1 |
| Description | SART-1 family |
| TAIR curator summary | Encodes a protein belonging to SART-1 family. The gene is expressed in the basal region of the developing embryo during heart stage. Phenotypic analyses of dot2 mutants suggest that this protein plays a role in root, shoot, and flower development. dot2 mutants are dwarved plants that display an aberrant spurred leaf venation pattern and fail to flower. In the roots DOT2 appears to be require for normal meristem organization and maintenance and the proper expression of PIN and PLT genes. |
| Alias | [DOT2][MDF][DEFECTIVELY ORGANIZED TRIBUTARIES 2][MERISTEM-DEFECTIVE] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 1.41421 |
Ahg946015 | proline-rich spliceosome-associated (PSP) family protein |
| 2.64575 |
Ahg916256 | KRR1 family protein |
| 2.82843 |
Ahg317971 | ubiquitin-specific protease 13 |
| 3 |
Ahg951489 | WD-40 repeat family protein |
| 3 |
Ahg492144 | DEK domain-containing chromatin associated protein |
| 3.16228 |
Ahg473467 | RING/FYVE/PHD zinc finger superfamily protein |
| 3.16228 |
Ahg476840 | eukaryotic translation initiation factor 2 (eIF-2) family protein |
| 4.12311 |
Ahg488117 | RNA helicase family protein |
| 6.78233 |
Ahg936861 | |
| 6.85565 |
Ahg927067 | eukaryotic translation initiation factor 2 (eIF-2) family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|