Detail



ID : Ahg346618

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|346618|fgenesh1_pg.C_scaffold_5000010
Sequence
ATGGAACCAC CGCCTTCTTC TCTTTCCTCC ACCGCGGTGG CTTCCTCCTC TATCCCCGCC GCAACGGCCC CTGTTCCTCC TCCTCCACCT CCTCACGTGA CTTCTTCTTA CCCCGACTCT CTCGACTCCT CCCCTCGTTC TCGCACCACC GATGGCTGGG ATGACCTTCC TGCTCCTTCC GGCGGCGGCG GCGGTAGCGC CGTCTCTTCT AAACTCCGTC TTATGTGCAG CTACGGCGGT CATATCCTTC CTCGCCCTCA CGATAAGTCT CTCTGCTACA TGGGCGGCGA CACTCGCATC GTTGTCGTCG ACCGCAACTC CTCTCTCCCT TCTCTCCTCG CTCGTCTCTC CAACACGCTC CTCGACGGTC GCTCCTTCAC CCTCAAGTAC CAGTTACCCA GCGAAGACCT TGACTCTCTC ATCTCCGTCA CTACCGACGA AGATCTCGAC AACATGATCG AGGAGTATGA CCGTACCATC TCCGCCTCCA ATTCCACCAA ACCCTCGCGC CTCCGTTTGT TTCTCTTCAC CTCCAAGCCT GAGGCTACTC AGTCTATGGG TCAGATCCTC GAGAGCTCTG CCAAGAGCGA CGATTGGTTC CTCAACGCTC TCAACAGCGC TGGTCTCCTC AATCGAGGAT TCTCTGATTC TGATGCCAAC GTCAATCGTT TACTTGGTTT GGACGATGCT CTTGCTCTCC GCTCTAATTC CGGTGACAAC AACACCAATC GAGATGGAGA TGACGGCTCC GTTAAAAGCG CCAAGCACCA ACAGATCCAG CAGCCTCCGC CGCCGCAAGG AGGCCAAGAT GTGAACTGCT TACCGGATTC TCCCATGTTG GATACATCCT CTTCTTTCGG CTCTACTTCT TCCTCTCCCT CTCTCGCCAA TTTGCCGCCC ATTCGTGTCC ATGTAGAGGA ACCCGGCGGG GTTAGGACTT TGCCAGATCA GAGAAATCTG GGAATCGAAG AACAATTCGC ACGATTCAAC GTTGGGAACA AGCATCAGCT ACAGGACGAC GGATTTGCTG CGATCTCTTC ACCACCGCCG ATGCCTGTCA CAATCGCCCT TCCTGCTGCG CCTGTGAGTG CTGCGACCGT CTCAAATGAG TTCCAGGCGA GGGTTTTCTC GGACGACGAG AGATCCGATC ACGGCGTGCA GGCTGGATAC AGAAAACCTC CGACTCCACG ATCGCAGCCG CAGAATCTAC CGCCTCAGCA GGCTCATCAG CTCAAGTCAA ATAGCGGTGG ACACGAGCTG CCATCACCAA ATTCCGTTTC CAGTGATAGC AGTATGAGCA ACCCAATGTT TCACCAAAGA CCTTCTGTCT ATCAAGAACC AATCCCTCAG ATGCCCTCTG GCTCTACCGT AGTTACTGGT ATGATCAATC CCTCAGATCC AAGCACACTT TTGTCCCAAC ATCAGAATCA GGACCCAGCA TACATCCTTC ACCCCCAATT TGAGCAACAA TCTGCACAAT CTCAGCCACA ACAGCAGCAA CAGTTCATAC ATACTGCTCC TCCTCCTCCT CAATACATTC ATCACCATCC GTCTAGCGGC CTTCCTGTTC AGACTTACAT CCAGGTTTAC CCTTCGCAAC AGCCGCAGTC CTTCCACCAA CACCCAGGTC GAGTGGATCA GCAGCCTTAT CCTGTTTATT ATGTCACTGC TCCCGTCCCA CCTAGGCCCT ACAGTATGCC TGTGCCACAA TCTCCAAGTG TGAGCGAGGC TCCAGGATCT CTCCCTTCTA GCACCATGAT GCCTCCACCT CCTAACAACC ACATGAGAAG TGTTAGCGGT GGCAAACCTG AGATGGGACA GGCTGGGGTT TACACAACAG CCCCAGGTGT GGGCGGTACT CAGATGGTTC ACCAGATTCC AACAAACCAG CAGCAATTCA TGGGGTATTC GCAGATCCGT CACCCTCCTC AGTCTGGTTC AGCTGGGAAT CCAAACTATG GATATGAATA CGCCGACAAT GCTCATACAC AGATATACTA CACTCAACCT CTGGGACATG CACAGTACCA GACAATGACT GGGCCTCCAC CTGCCATGGT GATGCCTGAT GGCTCTGCTG CTGCTAAGCT TCCAGCTGAG AACATGACTC AACAGATCCG GAGTTCACAG CCATTGTGA 
Length2139
Protein Sequence
Protein Residue
Map Locationscaffold_5: 124528.. 126780
Download Sequence
A.thaliana
AGI-codeAT2G01190.1
DescriptionOcticosapeptide/Phox/Bem1p family protein
TAIR curator summary
Alias[PDE331][PIGMENT DEFECTIVE 331]
Gene coexpression
MR
MR Locus Description
12 Ahg940683 Protein of unknown function (DUF803)
13.4907 Ahg491431 ENTH/VHS/GAT family protein
13.5277 Ahg477046 Curculin-like (mannose-binding) lectin family protein
15.6205 Ahg492011 oligopeptide transporter 1
16.8523 Ahg475320 ABC-2 and Plant PDR ABC-type transporter family protein
21.6795 Ahg943817 Arabidopsis phospholipase-like protein (PEARLI 4) family
25.3969 Ahg951624 armadillo repeat only 2
26.9815 Ahg926342 trehalose-6-phosphatase synthase S8
28.3549 Ahg941394 beta-amylase 3
31.3688 Ahg477399 SPFH/Band 7/PHB domain-containing membrane-associated protein family
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression