Detail



ID : Ahg347189

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|347189|fgenesh1_pg.C_scaffold_5000581
Sequence
ATGGCAGGAG GAACAGAAGC GTTTCCTGAT CTTGGAGAGC ATTGCCAAAA CCCTGATTGC AAATTACTCG ATTTTCTCCC TTTTACTTGT GACGGCTGCA AATTGGTGTT TTGTTTGGAG CATAGATCAT ACAAGTCACA TAATTGTCCG AAATCCGATC ACGGAAGCAG AACAGTTTCC ATCTGTGAAA CATGTTCTAT AGCTATCGAA ACAACTGGTT TTGGTGAAGA AGGAATCAAA TCTTTGCTTG AGAAACACGA AAGATCCGGA GATTGTGACC CGAACAAGAA AAAGAAACCA ATATGTCCTG TAAAACGTTG CAAAGAGATT CTGACTTTTG CAAATAACCT TACTTGCAAA GATTGTGGAA TCAAGTTCTG TTTAAAACAC CGGTTTCCGA CAGATCATGT TTGTAACAAG AAAACCATAA CTACCGCAAG AACAAGCTCG CGGTGGAACG AGAGGTTTAT GGAAGCTTTA AGTTTGAGAA ATGAGAAAGG CTGTGGAAGA GGAAGCTCTG TTTCATCAAG ATCTCCACCA TCAGTTAGAT CCTTTTAG 
Length558
Protein Sequence
Protein Residue
Map Locationscaffold_5: 4106379.. 4107014
Download Sequence
A.thaliana
AGI-codeAT3G28210.1
Descriptionzinc finger (AN1-like) family protein
TAIR curator summaryEncodes a putative zinc finger protein (PMZ).
Alias[PMZ][SAP12][STRESS-ASSOCIATED PROTEIN 12]
Gene coexpression
MR
MR Locus Description
3 Ahg471490 Regulator of Vps4 activity in the MVB pathway protein
4 Ahg484989 C2H2 and C2HC zinc fingers superfamily protein
5.47723 Ahg943961 Glycolipid transfer protein (GLTP) family protein
16.8819 Ahg921472 Matrixin family protein
17.2047 Ahg312360 Protein of unknown function (DUF1262)
20.8327 Ahg476541 Calcium-dependent phosphotriesterase superfamily protein
24.8998 Ahg486477 beta glucosidase 27
26.8328 Ahg488928 blue-copper-binding protein
29.4958 Ahg354029
29.6648 Ahg472781 FAD-binding Berberine family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression