Detail



ID : Ahg350640

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|350640|fgenesh1_pg.C_scaffold_6001233
Sequence
ATGAAGCGGA TTGGAGATGA AATTGACGGT TCTGGGTCAC AAGTTAAACC TCCATTGGGC TCCCCTCCAA ACGAATCATG TGGGCAATCT CCAGTACCTG GAAACGGTGA CAACAGAGGA GGGATCATTG GGGACAGGGG AGTTAACACT CAGAGATTGA GCACAGATGA TGCTTTGACC TACTTAATGG AAGTAAAGAG GACGTTTCAA GATCAAAGGG ACAAATATGA TATGTTCCTT GAGGTTATGA ACGACTTTAA AGAGCAAAGG ATCCATACTT CTGGTTTGAT TGCACGAGTG AAGGAGCTAC TTAAGGGTCA TAACAATTTG ATTCTCGGGT TTAATACCTT TTTGCCTAAG GGGTATGAAA TAACTCTTGA TAATGAGGAT TGA 
Length393
Protein Sequence
Protein Residue
Map Locationscaffold_6: 5857975.. 5861254
Download Sequence
A.thaliana
AGI-codeAT5G15020.1
DescriptionSIN3-like 2
TAIR curator summaryEncodes a homolog of the transcriptional repressor SIN3 (AT1G24190).
Alias[SNL2][SIN3-like 2]
Gene coexpression
MR
MR Locus Description
3.74166 Virus3947
3.74166 Virus0819
6.48074 Ahg949811
14.6969 Ahg927054 Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein
14.9666 Ahg926488
16.7332 Ahg913105 ATP-dependent helicase family protein
18.3303 Ahg952413
19.4422 Ahg482930 Protein kinase superfamily protein
20.3224 Ahg482123 low-molecular-weight cysteine-rich 75
20.9762 Ahg929694
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression