Detail



ID : Ahg351449

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|351449|fgenesh1_pg.C_scaffold_6002042
Sequence
ATGGTGGTGG AGGTAGCAGT GGTGGTGGTG ACTGTCATGG TGGTTGCGGC GGTGGTGGTA GTGATAGTGA TAGTGGTGAT GGTGACGTTA TGGGGGAAAA TAGGGGCATC ATTACATAGG TCTCACAAAT CCAAAGCTAT TGGAGGCATA CCACCATACC TTATGCCATT CTTTGGGATG TTTGGATATG GAGGTCCTTA TGCGTGTATG CATTTGGGAA GGCGTACTTT GGTGTCTTCA AAGACGAAAC TGTCTAAGAA AGTGTTCACC TTGCAACTCA ATCGAGAAGC TTTGACTGAC AATCGTTCTA TCTTAGGAAA AAACTGGAAG TCTATGTCAT TAAATGCTGA TGGTGGAATG AGGGATCCTC TGGAGGAGGA AATCAAGCTA TCACCTCATG GAAGCTTCAC AAAGGTTGAG ATATTTGAAT CGGAATGTAA GATTCCAGAA ATATATCAAC TTCAGTGCAG ACTTAAGGAT ATATATTTTC CTTACATCCA GTGTGATGAA ATCTCTAAAA CTGGGAGGAC GGAAAGGCCT GTAGAGTTTC AGGGAAACTC AATTACTACT AACAAAAAGA AGGTTGTTGA ACCTTCTTCG AAGGTGGGAA GTTGGAAACT TGCTTCTAAT ATTGAGTCCA CGCGGCAGTA TAATGTTCAG GTGGGTTCTT CACTTCCTCC TTTCTCTATC GCATGCTTTG ATGAATATGA AAATCAGATA GCATTCACTT CTGTTCCAAC ACTGGAAGTT GAACTAAAAG CCAGCCCTGG ATTCCAAATA AAGATTGATA TGATTGAGGG CCAACCTGAT TATGAGGCAA CCTTAGAGAT ATGCTCAAAG GACGAACCAT TTTCCGTCTT AGTTGCTTGT AAAGTTAATC CTCGGCCTCT GAAGCATGTT GTTGAGATGT ATCCAGAGTC TTTGGAATAT TTGCTTCCAG GCTCTACTGT TCAAAATTAT ATCCTGGAGA TGTTCGATGG ATATAATAAC CATGTTGCAG AAGGGACCGA TGTTCTGATA TGTATTGAGG GCTATTGTAT CAAAGACCCG ATGGGCTTTA ACCGAAAGGT CAATAGTTGT GGCTGCGTTG ATCTGTCTGG AATTCTCCAA GTCACGGCCA GCTATGGGAA ATCTATATCA CTCTCTGTTA TGTATGGTAT TGATGAGATC TTTAAGAAAG AGTCTCTGAT TGAGAGACGA GAGCTCATGC TCTTAACAAA GCTGCCTGAC TGCTGTGCTG CTGGTTCAAA TCTTACAAAC CTCATTTTCG AAGTGACGGA TTCAGATGGT GCTATGGATA CTAGTATCCA TCATGACGAA AAATCAGGAT GTTTCCATAC CATGAGCATT GAATCTGATT CAAGAAGCGT TGAGAGTGCA ATCAGATATG CCTTTGTCCA CGAGTCCTGC AAAGTTCCTA CTCTTTCCCT ACCTGAGAGC GAGGGTGTCT TTTCTTTCAG GGTTTTCCAT TCTCGATTTC CCGAGCTTCA TCTGACCTTA AATGGGTTAT CTTACAATAT GATTTACCTT GAGATTCAGC TAACGCCTGC TCAAATATTT GAAAGAGATG AGATTGGGTG TTCTACACCT TATTCAAGGA TGAGTTTAAC ACCTCAATCA AAGATGGCTT CAACCACAAA TTCATCGGTG GCTCCAACTG AACAAACTCC ATGTTCACAG TTTAGAGTTT TGGCCATTAG GGCATCGTCA TCGGCTCTCA GTAGCCAAAC TAGCCTGTTG GATATGGCAC AGTTCACTGA GAGCTTAAAA GAAAAACTTA TTAGATACAG TGAAGACATA GTGGAAGTAG ATGAGCGCCT AAAATGTTTG GAAGCCGAAC AAAACCAGGC TAAGGAAGAG TTGAGTACCT TGCAAGCTTC TCTGGAAACT CTCGGTGCTA CATTCCCAGA ATGCCTATCC ACCAAAGAAT CAATGATGAA ACAGATTAAA GAGAAGCATC AGGACACTGC AGCATCGGTT TTCTGTTGTT TGTATAGAAA GGCTCCGCCT CCACAGTCTC GGTTTCTGTC AAAGAAAGGA GTGTTTGGCC TTGTAGAACT TCTTGGTTCA GTTGCTTCCA CCTCCCCTAG CAGGTGA 
Length2097
Protein Sequence
Protein Residue
A.thaliana
AGI-codeAT5G24280.1
Descriptiongamma-irradiation and mitomycin c induced 1
TAIR curator summary
Alias[GMI1][GAMMA-IRRADIATION AND MITOMYCIN C INDUCED 1]
Gene coexpression
MR
MR Locus Description
22.5832 Virus1108
60.9098 Ahg892253 RNA-binding (RRM/RBD/RNP motifs) family protein
64.2495 Virus1847
80.0562 Ahg943726
80.796 Ahg944374
88.5212 Ahg908719 MATE efflux family protein
89.4427 Ahg951054 F-box family protein
94.0106 Ahg925265
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression