Detail


ID : Ahg352267

Blast(Query):  A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|352267|fgenesh1_pg.C_scaffold_6002860
Sequence
ATGGCGTATC ATCCGGCTTA TACTGAGACT ATGTCAATGG GAGGAGGGTC AAGCCACGGG TTTGGCGAGT GGATTGACCA GCAAATTGTG CCGTTTGCTA CGAGTAGTGG CTCTTTGAGG GTTGAATTGT TACATGGTAA CTTAGACATT TGGGTTAAGG AAGCTAAACA TCTTCCTAAC ATGGATGGGT TTCATCACAG ACTTGGTGGA ATGTTGTCTG GGTTAGGTCG GAGGAAAAGT AAAGTCGAAG GTGACAAGTC TTCTAAGATC ACAAGTGATC CTTATGTTAC TGTGTCTATC TCGGGTGCTG TGATTGGTAG AACTTTTGTT ATTAGCAATA GTGAGAATCC TGTTTGGATG CAGCATTTCG ATGTACCGGT GGCTCATAGT GCTGCTAAGG TTCACTTTGT TGTGAAAGAC AGTGATATTA TTGGATCACA GATCATGGGA GATGTTGGAA TCCCAACCGA GCAGTTGTGT TCGGGGAATA GGATCGAAGG GCTGTTTCCG ATACTTAATA GTAGTGGGAA GCCTTGTAAA CAAGGTGCTG TGTTGAGTTT GTCTATTCAG TACACTCCAA TGGAAAGAAT GAGACTTTAC CAAAAGGGTG TTGGTTTCGG TGTTGAGTGT GTAGGAGTTC CTGGTACATA CTTCCCTTTG AGGAAAGGTG GTAGGGTTAC TCTGTATCAG GATGCTCATG TTGATGACGG TACTCTTCCG ATTGTACATC TTGATGGTGG GATTCAGTAT AGACATGGGA AGTGTTGGGA GGATATGGCT GATGCAATAA GACAGGCAAG GAGGTTGATT TATATCACAG GTTGGTCAGT TTTCCATCCG GTTAGGCTGG TTCGTCGTAA CAAGGATCCA ACCGAAGGTA CATTAGGGGA GTTGCTTAAA GTCAAATCTC AAGAAGGTGT TAGAGTGTTG GTTTTGGTGT GGGATGATCC AACTTCAAGG AGTCTTCTGG GATATACAAA ACAAGGAGTT ATGAACACAA GCGATGAGGA GACTCGCCGT TTTTTCAAGC ATTCGTCAGT GCAAGTTCTC CTTTGTCCCA GATCTGGGGG AAAAGGTCAC AGCTTCATAA AAAAATCTGA AGTTGAAACA ATCTACACGC ATCATCAAAA AACTGTCATT GTAGATGCTG AAGCAGCTCA GAACAGAAGA AAGATCGTAG CATTTGTTGG AGGGCTAGAC TTGTGCAACG GACGATTTGA TACTCCAAAG CATCCTCTCT TCAGGACATT AAAGACACTC CATAAAGATG ACTTCCATAA CGGAAATTTT GTGACTACTG CGGATGATGG ACCAAGAGAA CCATGGCATG ATCTGCACAG CAAGATTGAT GGTCCAGCTG CATATGATGT GCTTGCTAAT TTCGAGGAAC GCTGGATGAA GGCTTCAAAA CCTCGAGGAA TTGGGAGACT AAAATCTTCT TCTGATGATT CTCTGCTTAG GATAGACAGA ATTCCTGACA TCATGGGACT TTCTGAAGCT TCTTCTGCTA ATGATAATGA TCCAGAGTCT TGGCATGTTC AGGTTTTCCG TTCAATTGAT TCAAGTTCAG TCAAAGGGTT TCCAAAGGAC CCAAAGGAAG CTACTGGAAG AAATCTTCTA TGTGGGAAGA ATATTCTCAT AGATATGAGC ATACATGCAG CTTACGTTAA GGCAATACGA TCTGCTCAGC ACTTCATTTA CATTGAGAAC CAATATTTTC TTGGATCATC ATTCAACTGG GATTCAAACA AAGACTTGGG TGCTAATAAT CTAATCCCGA TAGAAATCGC GCTTAAGATT GCTAGTAAGA TTAGAGCAAG GGAGAATTTT GCTGCTTATA TTGTCATTCC AATGTGGCCA GAAGGTGCTC CTACAAGTTA CCCTATTCAG AGAATTCTCT ACTGGCAGCA CAAAACAATG CAAATGATGT ATCAAACCAT CTACAAGGCA CTTGTGGAAG TTGGTCTTGA TAGCCAGTTT GAGCCACAAG ACTTTTTGAA CTTTTTCTGT CTTGGAACCA GAGAGGTTCC TGATGGAACA GTTAGCGTAT ATAATAGTCC TCGGAAGCCA CATCAGTCAA ACGCACAGGT GCAAGCTTTA AAGAGTCGGA GATTCATGAT TTATGTTCAT TCAAAAGGTA TGGTAGTGGA TGATGAGTTT GTCTTAATTG GTTCCGCGAA TATCAACCAG AGATCCTTGG AAGGAACTAG AGACACTGAA ATCGCCATGG GAGGGTATCA ACCACACCAT TCATGGGCTA TGAAAGGTTC TCGTCCTCGT GGTCAGATCT TTGGATACAG AATGTCGTTA TGGGCAGAAC ACTTAGGGTT TCTAGAGCAA GGTTTCGAGG AACCAGAAAA CATGGAATGC GTGAGACGAG TTAGGCAATT GAGTGAGCTC AATTGGAGAC AGTATGCCGC AGAGGAAGTC ACAGAGATGC CAGGTCATCT TCTTAAGTAT CCAGTTCAAG TCGATAGAAC AGGTAGTGTG AGCTCTCTTC TTGGATGCGA GACGTTCCCA GATCTCGGTG GCAAGATCAT AGGATCATTC CTTTTGGGCC AAGAAAATCT CACCATCTGA
Length2580
Protein Sequence
Protein Residue
Map Locationscaffold_6: 20343084.. 20346954
Download Sequence
A.thaliana
AGI-codeAT4G11850.1
Descriptionphospholipase D gamma 1
TAIR curator summaryphospholipase D (gamma)
Alias[MEE54][PLDGAMMA1][maternal effect embryo arrest 54][phospholipase D gamma 1]
Gene coexpression
MR
MR Locus Description
22.4944 Ahg920054 Flavin-binding monooxygenase family protein
34.641 Ahg475187 S-locus lectin protein kinase family protein
42.4264 Ahg477399 SPFH/Band 7/PHB domain-containing membrane-associated protein family
50.7937 Ahg475116 WRKY family transcription factor
53.4416 Ahg492857 VACUOLAR SORTING RECEPTOR 7
60.0333 Ahg484411 plant intracellular ras group-related LRR 2
62.2174 Ahg355547 Protein kinase superfamily protein
63.1664 Ahg480406 fucosyltransferase 4
64.4981 Ahg496649 oligopeptide transporter 4
70.0571 Ahg915669 Glutathione S-transferase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression