Detail



ID : Ahg352314

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|352314|fgenesh1_pg.C_scaffold_6002907
Sequence
ATGGAGCTCA ACAAAGTCCG ATCAATCCTC TCCTCTCACG CGCTCTTCAC CTCACGTGCA CCACTCACGC TTAACTCCGT CGTCCTTGAA GAGCCAGACA AGAACCTAGT CCGACAATGG GACAAAGGAG ACCAACTCCC AACAAGAAAG GCTTCTGTGA TCGCACGTTT AGGAGGTGAT TCACACGTGC TTACCGTTGA CTTATCTACA AATCTTGTTG ATTTAGTGGA TAGTCCGGTT CCTAAATCCG GTTACCCGAT TGTGACGTCG GAGGAGATGG ACAGCGCCGC GAGTGCACCA TTCTCAAACG CAGATTTCAA CCGTACGATT CTTTCTCGTG GAATAAATCT AACGGACGTG GTTTGTATCC CAATGTCTAG TGGCTGGTTT GGTAATAAAG AAGACAACAA AAGGGTGACT AAAATCCAGT GTTTCTCATC TCAAGGTACT CCTAATTTCT ACATGCGACC TATCGAAGGT TTGACTCTAC TTTTTGATTT AGATACGAAG CAAATACTTG AGATAACCGA TACCGGTCAA TCAATACCCA TACCCGGTTC AACCAATACC GATTATCGAT ACTCCAATTT TCCGAGCCAG GACAAAACCA GACCTCTCAA TCCAATCTCC ATCGAGCAGC CACATGGTCC AAGCTTTGTA ATCGAGGATA ACCATATAGT AAAATGGGCA AATTGGGAAT TTCACTTAAA ACCGGACCCG AGAGCCGGTC TGATTATATC CCGGGTCAGA GTACATGATC CGGATACTGA AGAGACACGT GAAGTGATGT ACAAAGGTTT CGTGTCGGAG CTTTTTATTC CATACATGGA TCCATCGGAA GCTTGGTACT TCAAGACTTA CATGGACGCA GGAGAGTACG GGTTGGGGTT ACAAACCATG TCGCTCGAGC CGCTTAACGA TTGTCCAAGA AACGCCGTTT ATATGGACGG AATATTCGCT GCGGCTGACG GAACGCCGTT TGTGAGAGAG AATATGATTT GTGTGTTTGA GAGTTACGCC GGAGATATTG CGTGGCGTCA CACCGAGTAT CCCGTCCCCG GCATGCCGCC GTTACGGGAA GTGAGACCAA AGGTGACGCT TGTGGTACGA ATGGTAGCCT CAGTGGGTAA CTACGATTTC ATCATTGATT ATGAGTTCCA AACTGATGGG CTTATGAGAG CAAAGGTTGG GCTTAGTGGA ATCTTGATGG TAAAAGGGAC ATCGTACGAG AACAAGAACC AAGTGAAGAA AGACAAAGAA GGTAATGAAG AAGAGCTTTA TGGCACAATT CTGTCTGAAA ATGTAATTGG AGTTATTCAC GACCACTACG TCACTTTTTA CTTTGACCTC GACGTTGATG GCCCGGAAAA TTCCTTTGTT AAAGTGAACC TTAAGAGGCA AGAGACGGCG CTAGGTGAAT CACCTAGGAA GAGTTACATG AAAGCGGTTA GGAACATTGT GAAAACCGAA AAGGACGGTA AGATCAAGCT TAGCTTGTAC GATCCATCAG AATACCACGT CATTAATCCT AGTAAAACCA CTCGGGTTGG TAACCCGAGG GGTTACAAGA TTGTGCCTAG AGCCACAGCA GCAAGTCTGC TTGACCATGA TGATCCACCA CAGAAGAGAG GAGCTTTTAC TAATAACCAA ATTTGGGTTA CTCCATACAA TAAGTCCGAG CAATGGGCTG GTGGTTTGTT CACTTACCAA AGCCACGGTG ATGATACTCT TGCGGTTTGG TCCGACAGGG ATAGAGATAT AGAGAATAAC GACATTGTGG TGTGGTACAC GCTCGGGTTC CATCACATTC CATGTCAAGA AGATTTTCCG ATAATGCCCA CGGTTTCTTC AAGTTTTGAT TTGAAGCCCG CAAATTTTTT CGAGCGCAGT CCAATTCTTA AGGCCGCTCC AAACTTTGAA TATGACCTTC CGGTTTGCGG AGCCAAATCT GTTTCTGCTT GA 
Length1962
Protein Sequence
Protein Residue
Map Locationscaffold_6: 20621632.. 20624820
Download Sequence
A.thaliana
AGI-codeAT4G12290.1
DescriptionCopper amine oxidase family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
2 Ahg943129 Copper amine oxidase family protein
4.24264 Ahg941035 Ankyrin repeat family protein
5.19615 Ahg344726
6 Ahg484673 NAC domain containing protein 3
7.07107 Ahg919779 branched-chain amino acid transaminase 2
8.12404 Ahg473561 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein
8.3666 Ahg474732
8.66025 Ahg924095 BTB/POZ domain-containing protein
8.7178 Ahg497391 Protein of unknown function (DUF1313)
10.0995 Ahg496085 ZRT/IRT-like protein 2
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression