Detail



ID : Ahg353011

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|353011|fgenesh1_pg.C_scaffold_7000184
Sequence
ATGGAGAGAT ACGACATCTT AAGAGATCTT GGTTCCGGTA ACTTTGGAGT TGCTAAGCTT GTCAGAGAGA AAGCCAACGG AGAGTTTTAT GCCGTTAAAT ACATCGAAAG AGGCCTTAAG ATTGATGAAC ATGTTCAGAG AGAGATCATA AACCACAGAG ACTTGAAGCA TCCTAATATC ATCAGATTTA AAGAGGTTTT TGTAACACCA ACACATCTTG CCATAGTAAT GGAGTATGCA GCTGGTGGTG AACTTTTTGA AAGAATTTGC AATGCCGGTA GATTCAGCGA AGACGAAGCA AGATATTATT TCAAACAACT TATCTCGGGA GTTAGCTATT GTCACGCTAT GCAAATATGT CACAGAGACC TTAAGCTCGA GAATACACTC TTAGACGGGA GCCCGTCTTC GCAGCTCAAA ATATGCGATT TTGGATACTC GAAGTCATCA GTTTTACACT CTCAGCCAAA ATCCACCGTG GGAACGCCAG CTTACGTTGC TCCGGAAGTT TTGTCCCGGA AAGAATATAA TGGAAAGATT GCAGATGTAT GGTCGTGTGG GGTGACCTTA TATGTAATGT TAGTTGGTGC CTATCCCTTT GAAGATCCCG AAGATCCAAG AAACATTAGA AAAACCATTC AGAGGATATT AAGTGTACAT TACACCATAC CGGACTACGT CTGGATTTCC TCCGAGTGCA AGCATCTCTT ATCTCGTATC TTCGTGGCTG ACCCTGATAA GAGAATAACT GTACCGGAAA TCGAAAAGCA CCCGTGGTTC TTGAAGGATC CTCTGGTTAT GCCGCCAGAG GAGGAGAAAT GCGATAATGG AGTGGAAGAT GAAGAAGCAG CAGAAGAGAA GTGTCGACAG AGTGTTGAAG AGATAGTGAA GATCATAGAG GAAGCAAGAA AGGGAGTGAA TGGTATGAAT AATAATGATG GATTAGGGTT AATAGATGGG AGCATTGATC TTGATGATAT TGATGATGCT GATATTTATG ATGATGTTGA TGATGATGAA GAGAGAAATG GTGATTTTGT ATGTGCTCTA TGA 
Length1053
Protein Sequence
Protein Residue
Map Locationscaffold_7: 817625.. 820029
Download Sequence
A.thaliana
AGI-codeAT4G40010.1
DescriptionSNF1-related protein kinase 2.7
TAIR curator summaryencodes a member of SNF1-related protein kinases (SnRK2) whose activity is activated by ionic (salt) and non-ionic (mannitol) osmotic stress.
Alias[SNRK2-7][SNRK2.7][SRK2F][SUCROSE NONFERMENTING 1-RELATED PROTEIN KINASE 2-7][SNF1-related protein kinase 2.7]
Gene coexpression
MR
MR Locus Description
24.1661 Ahg492401 phosphoglucan, water dikinase
34.6987 Ahg488585 glutathione S-transferase phi 12
41.4729 Ahg485410 KIP-related protein 2
42.2493 Ahg480728 pyrophosphorylase 2
45.5631 Ahg941410 Ribosomal protein L33 family protein
61.5792 Ahg474732
62.8888 Ahg470930 threonine aldolase 1
70.2851 Ahg925037 splicing factor PWI domain-containing protein / RNA recognition motif (RRM)-containing protein
71.8331 Ahg490693 Glucose-1-phosphate adenylyltransferase family protein
73.4847 Ahg484766 chromatin remodeling 38
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression