Detail



ID : Ahg356210

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|356210|fgenesh1_pg.C_scaffold_7003383
Sequence
ATGGATTTGG AGTCTGTAAC TCTTAATGTT AAGCATGAAT GTATTGAAAT GAATGAGGAG GATGATGATG GAGAAACTGA AGGACTAGTA AGAAGTGAGA CACAACAGAC GCAAACGGTC TTTGAGTCTA ATCATTGTGT AAAAGACGAT GTTTGGAAAG AGTTTGCACC GATAGGAAAA GGAGAAGATG GCAAAGAAAG GTGTCGTTGT ATTCATTGTG GTAAGGATTT GGTTACACCT ACTTTCACAT CAAATTTGTG GCGACATTTA CGATCTTGCA CAAAGAAGAC TGAAACTAAA AGAGGAGGCA ATGGTTGTGG ACAAGATAGA CTGAACAAGG ATCAAAACAA ATGTAATTCT GTTGATGTGG TGGGAGCTTC GCTTTACGAA TCCTCTAGTG ATAGAGAAGG AGTGAGTAAC AACACTCTCT TGAAAAAGAG GCAACGTAGT TCGATATTAG AAGGCAAGAC ACGCTCGGGG ATGCTGCTTG GTTTGGATGT TCTGGACTGT CCTATTTGCT TTGAGGCATT GACTATTCCT ATCTTTCAGT GTGACAATGG ACATATAGCT TGTTCTTCTT GCTGTCACAA ACTGAGTAAT AAGTGCCCTA CATGTGCTTC TCCTGTTGGC CACAATCGCT GCAGAGCAAT GGAGAGTGTG CTCGAATCAG TCTTTGTCCC ATGCCGAAAC GCCAAGTTTG GATGCACCAA AAATGTGTCT TATGGGAAAG TATCAACTCA TGAAAAAGAA TGCACTTTCT CTCAATGCTC CTGCCCTGCA TTGGACTGCA ATTACACCGG ATCATACAAT GACATCTACA GTCACTTTGT TGATAACCAT CGTAACAAAT CCACATCTAT ATCCTTTGTC TGCGGTGGTT CTGTTGATGT TCAGATGAAC ATATCTACCG GTAATATTCT AGTACTTCAG GAATCTAAGA AGGGACTATT GTTTGCGCTG CAGTGTTTCT ACAAGCCGCT TGGTTTGTAT GTGACTGTTA GATGCATTGC ACCATCTACT CCTGAACTAG GGAAGCTTGC ATATTGTCTC TACTACTCTA TGGATGGACA AACTCTTACA TACAAGTCAC CAGAAGTGAA GAAGGTTCTT GAAGTGAGCT CTGAAACCCC TCAAGACAAT TTCATGTTTG TCCCTCACTC TTTGTTACGT GGTGAATTTC TGGAGATGAA GATTGCCATT GGACTTAAGG TTCATGCGGG CTCATAA 
Length1227
Protein Sequence
Protein Residue
Map Locationscaffold_7: 23117791.. 23119323
Download Sequence
A.thaliana
AGI-codeAT5G37890.1
DescriptionProtein with RING/U-box and TRAF-like domains
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
22.8254 Ahg328437 Protein phosphatase 2C family protein
36.7696 Ahg888758 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
49.3457 Ahg941035 Ankyrin repeat family protein
68.7605 Ahg344726
73.1984 Ahg493454 DNA-directed RNA polymerase II-related
74.4983 Ahg924719 Plant invertase/pectin methylesterase inhibitor superfamily protein
74.8331 Ahg497391 Protein of unknown function (DUF1313)
76.9415 Ahg484673 NAC domain containing protein 3
77.1881 Ahg492103 Protein of unknown function, DUF584
90.598 Ahg927049 Auxin efflux carrier family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression