Detail



ID : Ahg888758

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|888758|Al_scaffold_0007_744
Sequence
ATGAGGAACA TTACTACTAC AACCCGAACA ATGTTACTGC TTGTGATTAC AATTTTGATG GGGATTGCGT ATCATGGAGA AGCCATAGCA TGTCCGCAGG TAAACATGTA CTTAGCACAA TGTTTGCCTT ATCTAAAAGC TGGAGGAAAT CCGTCTCCGA TGTGTTGCAA CGGACTTAAT AGTCTAAAAG CCGCTGCGCC TGCGAAATCC GATAGACAAG TAGCTTGCAA TTGTTTGAAG AGTGTAGCTA ATACAATCCC TGGAATTAAT GATGATTATG CCAAACAACT CCCTGCTAAA TGTGGTGTTA ATATAGGAGT CCCTTTCTCT AAGACTGTGG ACTGTAACAG CATAAACTGA 
Length360
Protein Sequence
Protein Residue
Map Locationscaffold_7: 3091723.. 3092193
Download Sequence
A.thaliana
AGI-codeAT4G33355.1
DescriptionBifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
TAIR curator summaryPredicted to encode a PR (pathogenesis-related) protein. Belongs to the lipid transfer protein (PR-14) family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15.
Alias
Gene coexpression
MR
MR Locus Description
12.49 Ahg320539 Calcium-binding EF-hand family protein
36.7696 Ahg356210 Protein with RING/U-box and TRAF-like domains
62.3859 Ahg934176
63.2376 Ahg332687 transposable element gene
64.6993 Ahg887336
74.2024 Ahg475889 sulfur E2
88.8932 Ahg942990 RING-H2 finger A1B
91.4549 Ahg488772
99.1716 Ahg487822 elicitor peptide 5 precursor
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression