Detail



ID : Ahg356470

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|356470|fgenesh1_pg.C_scaffold_8000257
Sequence
ATGAATCCCA ACGAGTTGGA ATCAGCTACA ATTGATTCGT TCATCAAAAC TGTGAATCAA CTATATTCAA TTATACAACT TCAAGATGCT GATGAAGGAG TTAAGGAGGA GCATATTCAG GAGCACATGA TGCCAACCTC TAAGAGCATT GATGGTGAAA TTCGGGTGGA AAGGAGTTTA GACCCACCTA TGATGCAACC AAACAGTGGT TTGAATAGAA CCAAAAGTGC GCCTCCTCTG AATCTCCCTG ACTCTGTGAA TCTGATTCGC AAGCTACAGG GTGCTCTTCG CCGTTTGAAG CGTAATCTAA AACATATGGA GAGCCTTCAG TCTGAAGTGG AAACAGAGTT GACTATACAA CTTAATTCGC TTAATGAGGT GGTTGAAGGT GTGAAACCCT CTGATATGAG TTCAACCAAT AATGACTTGG AAGATATAAC CAAGAAGTTA TTGGACTTGG TAAGCAAGGT CACCGTGTCA CCTGAGAAGC AGAAAAGCAA GAAAGCCTCA CCGTATTATT TGGATGGCGA TGGGAGTAAA AACCGTAGAC CCATTGTTTG CTTGCCCGGC ATCCATGCAA ATGAAGAAGA CCTCAAAAGA CTCGCCGTTT TTAGATATGT ACAAGGCGAA CTAGATAAAG TTAGTGATCA ACAGAGGATG TGCCTGCTTA GCTTCGCTGT GTTCCCGGAG AATAAAGAGG TGAATAGAAC AATGCTGATG TATTGGTGGA TTGGGGAGGG CATTCTGAGT TCTCAAGACA TACCATCCGA AAAGGGCATT CTCAAACCCG AAGATGTTGT GCAGGACATT CTTGATGGTT TCACGGAGAA GAACTTGATT CAACCTGTTG AAAACAAACG CAAAATGGAG CCAAGTAGCT ATAAGATGGC CCCTTTTGTG CATGCTTCAG TGGTTCTTAT CTCCAAGGAG ATAGGGCTTT TTGATATGTA TGATGAAAAG GAGAAGCCAA CCATGAAACA TTCAAGACTG AACAAGGTAT GCCTAGTGGA AGGGTCGTCA AGCCAGCCAG AAGCAAAAGC TAAAAAAATG GACAGTCCTC ATCTGATTGA AACCGTGTTC AATGTTTCCG AGAGGTTCCC AGAATTTACA CGCAGGTGGT TCACACAAGC GAAGAAGCTC AGAGTTCTTT ACCTAGGAAG GTGGGAGAGA ACCGAGCGCG AGATTGAAAT GGATAGCCGT CGAGTTATGA AAGATTTGGG TTCCCTGACG AGTTTAAGGT TTTTGAGTTT TCAAGGTATC TTAACCATCA GAAGCCTTAG CCGTTCTGCT CTCAAGCTTA GGGAGCTGAT TATCTTGGAC CTCAGGGATT GCTATAACCT GGAGACACTT CCAGATGACA TCCATCAGCT CAAGAGTCTG GTCTATTTGG ATTTGACTGG CTGCGAAGCC TTAGAGAGCA TTCCGATGCA ATTGTCTTGG CTAGACAATC TGGAGGTCCT CAAGGGCTTT GTGCTCGGTG ATGTTGATAC ATCGATCAAA TGTAAACTGA GAGATCTGGT GCACTTGAGG AAGCTGCAAA ATCTTAGTGT TGTCGTACAC CAACAGGATT ATGGTTTGCA CGAGCTTGGA GTGGATATAA ATGATTTTGA AAAGCTGGAA AAGCTGAAAG TGCGGTGGGG AAGCATAGTT TCTGGATTTT CCCAAATAAA GATGAAGCCA GTCAAAGATG GTATAGTCAG TATCATCGAA CCCCCCAAGC TTTTTTCACT ACTTGAACGT ACAACTTATG TGCGGGGTCA TAAAAAACGA GAGCCTCGTG TTCCCGGAAA TTTAAAGAAA TTGAACCTGC AGCGTTTTCC TAATAGTGAA CTACCGAGGT TCCTTCAGCC TCATAACCTT CAACATCTGG AAAAGCTCCA CCTTGGAAGC TCGAGACTCC TCAAAAGTTT CGGGCCCTTA CCACCAAACC TGTATACATT TCCAGAACTG ATGGTGGTGC CTCATGTCAA AAGTGAAGCT TATGTTTGTG CTGGTGCTGC GAGTGAAGAG TCGAGCATGA GTAACACACC GTTTCTACTC CAAAGATGGG AAGGAAGCAT CAAGCTGTTC AACTTCATTG GACACTTTTG TGAAAGCAGA TATAGAGAGG ATACATGA 
Length2118
Protein Sequence
Protein Residue
Map Locationscaffold_8: 1706429.. 1709002
Download Sequence
A.thaliana
AGI-codeAT5G45500.1
DescriptionRNI-like superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
1.73205 Virus0452
2.82843 Ahg932028
4 Ahg947121
6.48074 Virus3781
6.9282 Virus1231
7.07107 Virus3160
13.7477 Virus1926
14.0712 Ahg929336
18.7083 Virus3045
19.4422 Ahg357347
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression