Detail


ID : Ahg356828

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|356828|fgenesh1_pg.C_scaffold_8000615
Sequence
ATGGTTGGTG ATTACAGAGG ACGCTTTAGT AGCCGTCGTT GCTCCGACGA CTCTGACGAT TCTTCCGACG ATGCTTCTTC CGTGGAGGGA GAGACCGCTT CTTCCGTGGA GGGAGAGACC ACTTCTTCCA TGTACTCTGC GGGGAAAGAG TATATGGAAA CAGAATGGAC TAATGAGAAG CATAGTTTAT ATCTTAAATC TATGGAAGCT TCATTCGTAG ATCAGTTATA TAACTCTCTC GGAGCTCTGG GGAAGAACGA GAATGTATCG GAATCGACGA GGTTCGGTAG CGGTAGAAAA CCGTCTCAAG AGCAGTTCAA GGTTCTTCAT GATGGTTTCT GGCAGAAGAT TAATGTTAAA CAACCTGAAC ATCGGATTAA CGGAAGACAC GGTAGTTCTC ATGAGTTTCT TAGGAGTCCA TGGATTAAGC ATTATAAACC TTTAGTAAAG ACGCAAATTT CGGTAATGGA TGCGCCCGAA AATCAAGTTG TTAGCAGCTC AAATGGGAAG AAGGTAATAG TTATATGCAG CTCTGGTTCA GCCTCGAATC TCAAGCAGAT ATGCTCTCAT TCGCGTGACC ACGACCAAAT CAGCGTTGGA GAAGAGGTAT CGGATCAGAA CTTTGTTAAC GAAGGAACAA AAGGCGAAAA TGGAAGCTCG AAGAAGATGA AGACAGTGAT GAGTGAATCG TCTAGTACCG ATCAGGTTGT TCCACTCAAT AAACTCTTGC AACATGACAT AAATTTGAAG TCTGTTTCTT GA
Length762
Protein Sequence
Protein Residue
Map Locationscaffold_8: 5178083.. 5179536
Download Sequence
A.thaliana
AGI-codeAT5G42900.1
Descriptioncold regulated gene 27
TAIR curator summary
Alias[COR27][cold regulated gene 27]
Gene coexpression
MR
MR Locus Description
1.41421 Ahg496297 CCT motif -containing response regulator protein
1.41421 Ahg491275
2.23607 Ahg475919 flavin-binding, kelch repeat, f box 1
2.82843 Ahg952367 SPFH/Band 7/PHB domain-containing membrane-associated protein family
2.82843 Ahg480346 CBS domain-containing protein with a domain of unknown function (DUF21)
3.4641 Ahg490342 sucrose synthase 3
4.12311 Ahg494776 B-cell receptor-associated 31-like
4.24264 Ahg934838 Integrase-type DNA-binding superfamily protein
4.79583 Ahg491320
5.2915 Ahg485038 Homeodomain-like superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression