| Annotation |
|---|
| Description | jgi|Araly1|358659|fgenesh1_pg.C_scaffold_8002446 |
| Sequence |
ATGGATTTGA ACGAGAGTGT CGTTCACTTT TCTCGTGGCA ATGGTATTGC AAAGCTTGAC AATTTCGGCG ATACGGCTCT TAGCTTGAAA TGTCTTGGAA GCAGTGCAGG AAGATTGATT GGAAGCTCTC ACCATAACCA TAAGCTTTGT TCTGATGTTT CTAATTGTCC TGATGGTGGC TGCCGGTTGG TTCTCGGTTT GGGTCCAACA CCGCCTTCGT ATTATTACAA TGTCACGGGT AATGATAATA ACATCAAAGG CTCAGCTTCT TCTAGGAGTG TTCAGGAACT CTCATCAGGA GGCAACTCAA TCCTGCAACT TGGTCCTCCA GCTGTGACCA TGGATACTTT CAGCGGACTT GATTGTTCGT TGTTGACATA CACGGATACT AATGTGTCCC AAGCTGTTGT TGACGAGGGT TCTACCTCAG CAAGGCGATC AGGTGGCTAT ATGCCATCGC TTCTTTTCGC TCCAAGGACG GAAAATGTTA GAAAACCTTC AAGAATGCAA GAGTGTAGTA CGAATTTTGG AACTGATGCT TATAATTCAC AGCTGAGCCA TGAGTCAGAG TTCTCTGTTG GCGCTTTCTC TGACAGGTCG GCATCTGCCA CGTCTTCTCA GCAAAGATTG AGCAACCCGA AGAAGTGCAA GTTTATGGGA TGTGTGAAAG GAGCTAGAGG AGCTTCGGGG CTCTGCATTG GCCATGGAGG TGGCCAGAGA TGCCAAAAGC TAGGTTGCAA CAAAGGTGCT GAGAGCAAAA CTACTTTCTG CAAAGCCCAT GGCGGAGGAA AGAGATGCCA ACACTTAGGA TGTACAAAGA GTGCGGAAGG AAAAACCGAT CTCTGCATAT CACATGGTGG TGGAAGACGG TGTGGATTCC CTGAGGGATG TGCTAAGGCT GCACGTGGCA AATCCGGGCT CTGCATCAAG CATGGTGGTG GTAAAAGGTG TAGGATCGAA AGCTGTACAC GAAGTGCTGA GGGACAAGCT GGACTCTGTA TTTCCCACGG TGGTGGACGG CGTTGTCAGT CTTCAGGCTG TGCAAAAGGT GCTCAAGGAA GTACAAACTA CTGCAAAGCT CATGGTGGTG GGAAACGCTG CATATTTGCG GGATGTACAA AAGGAGCGGA AGGTAGTACT CCGCTGTGTA AAGCACATGG TGGAGGAAAA CGCTGTATGT TTGATGGTGG TGGTATTTGT CCTAAGAGTG TGCATGGTGG GACGAGTTTC TGTGTAGCTC ACGGTGGTGG GAAGCGATGT GTTGTGGCCG GGTGCACAAA GAGCGCTCGT GGGAGGACTG ATTGTTGTGT GAAGCACGGT GGTGGGAAAC GGTGTAAGTC TGATGGTTGT GAAAAGAGTG CGCAAGGTAG CACTGATTTC TGTAAGGCAC ACGGTGGTGG GAAGCGCTGC TCATGGGGAG GAGATTGGAA ATGCGAGAAA TTCGCTAGAG GAAAGAGCGG TTTATGCGCT GCGCATAACA GTATGTCCCA GGATAAAGCT GGAAGCAAAG TTGGTTTGAT TGGACCGGGA CTTTTCCGTG GCCTTGTCTC TACTTCTTCA CAAACCACAA CAACTGCAAC TACTACTACC ACTGATCATT CTCAATCTGG AGTCAGCGCG GTCTCTGATT GCACGGACTC CATTGATCGC CCGCTGCCAC CGCTGCTTCA TCAACCAGAG AAAAGACAGA AGCTGATGAT ACCAATGCAG GTTCTTGTGC CTCCATCAAT GAAATCCTTA AGCTTCTCAA ACACCGAGAG ACCCGAAATC GAAACAAACA ACAACAGTAG TGGCAGCAAT GGGAGGAACA TCTTTGACTT TATGATTCCT GAGGAGAGAG TTCACGGCGG CCGGCTTATG TCTTTGCTTA ATGGTTTTGT GATTTTACGA TCGGAAATTT CGGTTCTTCT TCTTCGTTTT ATAGTTCAAT CGTTCTCGAT TTTGATTTCT TCAAGCTGTG ATGATGATTC TCGATTCTCC TACTGTAGCG GTATGTTGGA CAAAGACGAG CCGTTTGTCT ACAACGAGGT GGATTACAAG ACGCCGAAGC AGAGTCCCCA AACTTGGCCG ATGGATAAGA TCCGGCAGAG CCGTTTTCAA CATAAAATGT CATCTCTTTT GAGTCCGGTG ACTCCTAAAA GGAATTACAA CATCAGCAAT GCAAAGTCAC TCTTGCTGCA ATGCTTACGG GACGCTAAAT CAGATCCACT CCCTCGTAGG CGCTTTCCGG TTTCATGCAC AGATGAAGGA ATCTTGATGG ATGGTGTTCT GGTCACATCA GCCACTAAAA AGAAGGTGTC TGAGTCTCCT TCAAGCTGTC CCGGACGATC AGCGCGTTCT TCAATCTTCC GGAGTCAGCA CAAGAAGAAT ACAGAGTTTA GCAGCCCTAT AAGCGAATCA GGCCGTAACC AGGAAACCAC TCTGTCTCAG CAATCTTCTT CAGCTGGCGA GGGAAAGATT TTAGCAAATA GTCCTTGTAC ACCAAAGGCT GCTAATCCTT CAAAACTGCA AGCTTCTGCT GAACCATTCA TCCTCACACC AAGACAAGCT GCTTCTCCTT TTCCACCACA GCAACTGCCA TATGATCATT ATAATCCGCA GTTTCCATGC GCTCCATACC CGTACTTGCA CCGGCCTCGG CCTCTGATCT ACGTTTATCA GAGACCACCA CTTCTTCCGC TCTTACCCCA TGGGCCTGAC CCCTATACGC TAAATAGTCA AAAGGACTTT CCTCCAATTC TCTCTGGCAA CCAAACACCA ACCACCAGTC CACACTCACT TCCCACAACA CCTTCTTCTA GCCAGCCCAA CACAACCACC AGCGACTCAC CAGTCCACAC TCCCATATCT ACTACTTTTA CAGCCAATCT CAATACCAGT ACTACCACCT CCACACATGG CCCCTCACCT TCTGTTGATA GACTCGACAC AGTGGCGAAA ATACCAGACT TGTCGTCGTC ACCTTCTGAT GGACTCGAAA CAGTGACGCA GAAACCAGAC TTGGCTTCAC CTTCTACTGG ACGTGAAACA GTGACGCAAA AACCAGACTT GGCTTCACCT TCTGCTGGAC TTGGAACCAT GACGATAAAT AAAGACTGGT CACCCTCTGA TGATGGACTC CCAACATTCA CACAAGATCA ACTTGATTTT ATGAAATCAC ATAACAGGCT CTTCCCAGAC TATGTTTTCG GGCGTTACAA ATACAAAAAG AGAATGTCAG CTTTCAAACA TCAGGAGGAG CACCGGTAA |
| Length | 3249 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_8: 20214148.. 20218929 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G64552.1 |
| Description | conserved peptide upstream open reading frame 22 |
| TAIR curator summary | Upstream open reading frames (uORFs) are small open reading frames found in the 5' UTR of a mature mRNA, and can potentially mediate translational regulation of the largest, or major, ORF (mORF). CPuORF22 represents a conserved upstream opening reading frame relative to major ORF AT5G64550.1 |
| Alias | [CPuORF22][conserved peptide upstream open reading frame 22] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 7.61577 |
Ahg483146 | disproportionating enzyme 2 |
| 9.21954 |
Ahg496027 | RING/FYVE/PHD zinc finger superfamily protein |
| 11.225 |
Ahg483830 | cytochrome P450, family 78, subfamily A, polypeptide 6 |
| 19.7484 |
Ahg339115 | tRNA arginine adenosine deaminase |
| 22.8035 |
Ahg481882 | Tetratricopeptide repeat (TPR)-like superfamily protein |
| 24.0832 |
Ahg313369 | phosphoenolpyruvate carboxylase 4 |
| 24.1868 |
Ahg337630 | evolutionarily conserved C-terminal region 4 |
| 25.4165 |
Ahg477222 | nucleotide transporter 1 |
| 28.4956 |
Ahg475149 | glucose-6-phosphate/phosphate translocator 2 |
| 33.4664 |
Ahg481003 | Kinesin motor family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|