Detail



ID : Ahg358942

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|358942|fgenesh1_pg.C_scaffold_8002729
Sequence
ATGGCTGCCA ACACCATTTC TCTTTCCATC TCTTCCAACG TCGCCGCCTC TAAGAATCTC AGCTCCTTTC AAAGCCGTGC CTTTATTGCT CCTCCACCAA CCATTTCTTT CCCGGCAAAG TCTAAACCTG GGGAACTATC TTTATCTTCC TCGACTCTTT CCAAGTCTCG TGTGCGCGCC GGTGCTAGCC AGCTCATGAA CGAACCGCTT AACGATCAAC GCTCCTTCTC TTCTCCCACA GTCGTCGAGG TTGATCTGGG TGACCGGAGT TATCCGATCT ATATCGGCGC CGGCTTGCTC GATCACTCTG AACTTCTTCA AAGGCATGTT CATGGAAAGA GAGTGCTTGT GGTCACCAAT GATCGAGTTG CTCCTCTCTA CCTGGACAAG ACTATAGATG CTTTAACCAG AGGAAATCCC AACGTCACTG TGGAGAGTGT TATTTTGCCT GATGGAGAGA AATACAAGGA CATGGATACT CTCATGAAAG TCTTCGACAA GGCCATTGAG TCTCGCCTAG ATAGACGATG TACATTTGTT GCCCTTGGAG GCGGTGTGAT AGGAGATATG TGTGGATATG CTGCTGCATC TTACCTGCGT GGTGTTAATT TCATCCAAAT TCCTACCACT GTTATGGCAC AGGTTGATTC TTCTGTAGGT GGCAAAACAG GCATAAATCA TCGTCTTGGA AAGAATTTGA TCGGTGCATT TTACCAACCA CAGTGTGTGC TAGTAGACAC TGACACATTG AACACATTGC CAGATAGGGA GATGGCATCA GGCCTCGCTG AAGTGATCAA GTACGGGCTT ATCAGGGATG CCGAGTTCTT TGAATGGCAG GAGAAGAACA TCGAGGCATT GCTGGCAAGG GATCCAGCTG CATTAGCTTT TGCTATAAAG AGATCATGTG AAAACAAGGC AGACGTTGTG TCCCAAGATG AGAAAGAAAG CGGCTTGCGA GCAACCCTAA ATTTGGGTCA TACATTTGGC CATGCCATAG AAACTGGCTT TGGTTATGGA GAGTGGCTCC ATGGAGAAGC TGTTGCAGCT GGCACGGTAA TGGCAGTGGA CATGTCATAT CGTCTTGGTT GGATAGATGA ATCGATCGTT AAGAGAGTGA ACAAGATCCT AGAACGGGCG AAATTGCCTA CAACGCCTCC AGAGAGCATG ACCGTGAGCA TGTTCAAATC CATAATGGCG GTGGACAAGA AAGTGGCAGA TGGACTGCTG AGGCTGATTC TTCTCAAAGG CCCGCTGGGA AACTGCGTGT TCACGGGAGA TTATGATCGG GAAGCGTTGG ATGCCACGCT TCGTGCATTC TCCAAATCCT GA 
Length1332
Protein Sequence
Protein Residue
Map Locationscaffold_8: 21490793.. 21492888
Download Sequence
A.thaliana
AGI-codeAT5G66120.2
Description3-dehydroquinate synthase, putative
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
4.47214 Ahg888595 ATPase, F0/V0 complex, subunit C protein
13.784 Ahg473889 succinate dehydrogenase 5
15.906 Ahg339769 AMP-dependent synthetase and ligase family protein
16.8523 Ahg935574
17.8326 Ahg319057 Plastid-lipid associated protein PAP / fibrillin family protein
18.4932 Ahg919093 eukaryotic translation initiation factor 2 gamma subunit
20.347 Ahg495041 Protein of unknown function, DUF647
20.9284 Ahg496278 Leucine-rich repeat (LRR) family protein
21.7945 Ahg476412 translocase inner membrane subunit 23-2
30.1993 Ahg950332 profilin 3
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression