Detail



ID : Ahg950332

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|950332|scaffold_802219.1
Sequence
GAAGAAGGAA GAAGACGAAG ATGTCGTGGC AGACTTACGT CGACGATCAC TTGATGTGCG ACGTTCAAGG CAACCGCCTC ACCGCCGCCG CAATTCTCGG CCAAGACGGC AGCGTCTGGG CTCAGAGCAG CAATTTCCCT CAGTTGAAGC CTGAGGAAAT TCAGGGCATC AAAGACGATT TTACTTCGCC TGGAATACTT GCCCCAACAG GATTGTTCCT TGGTGGCAAC AAGTACATGG TAATCCAAGG AGAGCCAAAT GCCGTCATTC GAGGAAAGAA GGGAGCTGGT GGTGTTACCA TCAAGAAAAC CACCCAAGCT TTTGTCTTTG GTATCTATGA AGAACCAATG GCTCCTGGAC AATGCAATAC GGTCGTGGAG AGTCTCGGTG ACTACCTGAT TGAATCGGGG CTCTGAAACA CAAGCCGCTG CTATATTC 
Length438
Protein Sequence
Protein Residue
Map Locationscaffold_8: 16582449.. 16583419
Download Sequence
A.thaliana
AGI-codeAT5G56600.1
Descriptionprofilin 3
TAIR curator summaryEncodes profilin3, a low-molecular weight, actin monomer-binding protein that regulates the organization of actin cytoskeleton. Originally known as profilin5, and later named profilin3. Expressed in vegetative organs.
Alias[PFN3][PRF3][PROFILIN 3][profilin 3]
Gene coexpression
MR
MR Locus Description
9.94987 Ahg943195 fibrillin
10.583 Ahg319882 RPM1 interacting protein 13
11.0905 Ahg933137 Protein of unknown function (DUF1279)
15.2971 Ahg495412 HSP20-like chaperones superfamily protein
18.7617 Ahg478478 protein phosphatase 2CA
19.4422 Ahg496333
21.4476 Ahg490014 PGR5-like B
23.9165 Ahg919903 Protein kinase superfamily protein
29.2916 Ahg474807 Tetratricopeptide repeat (TPR)-like superfamily protein
30.1993 Ahg358942 3-dehydroquinate synthase, putative
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression