Detail



ID : Ahg359794

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|359794|fgenesh1_pg.C_scaffold_1048000001
Sequence
ATGGCTATTT CTTGGGATTT ATATGGAACA TCATTCTCAT TTTTACAGTC CATCGTCTTT CTAGAGGAAA ACTTCCTCGG AAACCTTTCA AAGCTATCAC CTGACTTATT TGTGAGAGGT TTAGAACTTA CTAGGTCAAG GAATCTCCGT GAAGGAATAG TAGATAGTGA GATTGATTTT GCTGACTACT CATCCGTAAC TGAAGCAATC AAAAGTAAGA TGGAGATTCG TGATATTTAT TCTTCTGCCT TGTCTATGTT CTTCGAGCAG GCTCCTTTTC CAGTATTACT TAACGAAATT ATGAGCATGG ATATATCTTG CGTGCCAGAG TTTCCAAGAT TAGCAGAGCT ACTGCTGCAA GTTTGGCAAC CTAAAAGTGA TAGTATTGAA TCAGATATCC GATTAATACT ATTCTGGCTC TTCCAAATAC GATCATCTTA CAAGATTCAA CCAGCTTCGG TACTCTGTCG ACTCTCTGAG ATCTGCTTAC GTCTCTTGAA GCACTTGTTC TCGCAAATAT CAGAACGGGG CTTTGTTTCT GGACCTTCTT CAGATAAGTT GGTTGCTCCT TTTGCAAAGT GGAAGCATCA AGTGGCCCAG ACAGTTCTTT GCCATCCAGT TGTGATGGCA CTGTTGGAGA GTCCCTTGGA TTGTGGCACA TTACCTCCAG TGCATAATGT TAAGATTTTT TCAGAAACGT CGCTGACGAC GAGCAGGCTA GTTATTTGTG AAATAGATCA ACACATCCTT GATCTATTGG TTTCTATTTG TGAGCACTTT TTGTTTGATG AGAGACACAT TGTGCAGGAA GGAGATCTCA GGGAAAATAA GTCAAGTACG GTTTTTAAGG ACTTGGTGCA AAGGCTTCTT TTGTTATTCA GAGACAAGTT TGAGCTTTGT GTTGGTTCTC AAAGTTACGC TCCGCTTCTC CAACCATCAC AATTAATTCA TGCGTTGTTG AGATTTATTT CACCTTTCAA AATTTTAGAG CTAGCCCGTT CCATGCTGAG TAAAATTGAT GAGGAAGAAT TGGCTAGCCC AAATTCGAGT ATGATTATCA GTTTGGGATT GGATATTGCT GGCGGAGCTT TTGAAATGCT TATATCTTAT TCACACCTGC CGGCTGCTAA GAGAGGGTTA TATGATTTGC TGTGGGAATT AAAAGAAGAG AATTATGACA GTATACTCAT TGAGGAAGTC TATAGCATGG CATGCAGGTT TTCTACCTCT TTTGGTTTGG TTTCGGCAGA TACTTGTTTG CTTAAAGTTG GGAGCAGCAT TTTCAGGGGG AAACATAATC GGCATTGCAA TGTTCATCCA TTGACCGTGA TAATTTCACA GATTGTTGGG AGAACTCCTA AAGACTTGAT TATCCATTAT ATTAACCAGC CAAGCATGAC CAGAGCCAAG ATATTGTTCT ATCTTGTGGA GTCCAGTCCC TTGCATCTGT CAGTCTTTGG ACACTCTTTC TTTAATTATT TGTGGGGTAA AGCTGCCTTG AAAATAAGAG AGGGACTGCG TTTTTCTCAG GATGCATATT ATGGTGGTGA AGCTGGTTTG GTGGAAAATC TCCAGCAGAT TCTTTTCAAA GAGAATCTTT GGATTGATCC CAAAATATGT GCTCAAACTC TTTTGTATTT TCCCTATCAA CGAACTGCAG AGGTATCGGA TAACTCTTAC ATATCTGATG ATCCAGTAAG CGAGAAATGC TCACCTGTTA TTGAACGGTA TGATCCGGCT TACATCCTGC CATTCTCAAT ACACTCATTG TCCATGGGAT GTATTGAACC TGTAAAATTC GCCAGTTCAG GCTTGCTTGC AGTTGCGTTA GCGAGCACGT CTTCAGCAGA TCTTGGGATG AGAAAATTGG GCTATGAAAC TCTTGGGATA TTTGTGCATG CCCTTAAGCC TGTTTTGATA CTCAAAGTCT CCTCAGAATC TCTAAGATAT TATCATTCCT TCAGTAGTAA CTGGTAG 
Length1977
Protein Sequence
Protein Residue
Map Locationscaffold_1: 21415693.. 21419062
Download Sequence
A.thaliana
AGI-codeAT4G27010.2
Description
TAIR curator summary
Alias[EMB2788][EMBRYO DEFECTIVE 2788]
Gene coexpression
MR
MR Locus Description
8.88819 Virus3540
38.4578 Virus3011
47.697 Virus1768
48.4665 Virus3363
53.4041 Ahg930119
61.4817 Ahg930767
86.9483 Virus3865
91.5369 Ahg349833 eukaryotic translation initiation factor 2 alpha subunit
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression