Detail



ID : Virus3865

     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
DescriptionTurnip_mosaic_virus|plants|ssRNA
Sequence
AAAAAATATA AAAACTCAAC ATAACATACA CAAAACGATT AAAGCAAACA CAAATCTTTC AAAGCATTCA AGCAATCAAA GATTCTCAAA TCTTTCATCG TTATCAAAGC AATCACCAAC AGCAAACCAA ATGGCAGCAG TTACATTCGC ATCAGCTATC ACCAACGCCA TCACCAGCAA ACCAGCACTC ACCGGAATGG TGCAGTTTGG GAGTTTCCCA CCAATGCCAT TGCGATCCAC CACCGTCACC ACAGTCGCCA CTTCAGTGGC GCAACCTAAA CTGTACACAG TGCAGTTTGG AAGCCTTGAC CCAGTAGTCG TCAAGAGTGG AGCAGGGTCC CTTGCTAAGG CAACACGCCA GCAGCCTAAC GTTGAAATAG ACGTTAGCCT CAGTGAAGCC GCAGCTCTGG AGGTTGCGAA ACCTAGATCG AATGCCGTGT TGAGGATGCA CGAGGAAGCA AACAAGGAGA GAGCACTCTT TTTGGACTGG GAGGCTAGTT TGAAGAGAAG CTCGTATGGA ATTGCTGAGG ACGAGAAGGT TGTAATGACA ACTCATGGCG TCAGCAAGAT AGTGCCCAGA AGTTCAAGGG CAATGAAGCT AAAGCGCGCA AGGGAGAGGC GTAGAGCGCA GCAACCAATT ATATTAAAGT GGGAGCCCAA ATTGAGCGGG ATCTCAATCG GAGGAGGGCT CTCTGCGAGC GTAATCGAAG CAGAAGAGGT TCGCACAAAG TGGCCGCTTC ATAAGACACC GTCAATGAAG AAGAGGACGG TGCACAGAAT ATGCAAGATG AACGACCAAG GAGTTGACAT GTTGACACGA TCCCTGGTTA AGATTTTCAA GACTAAGAGT GCCAACATTG AATACATCGG AAAGAAGTCG ATTAAGGTCG ATTTCATCAG AAAAGAACGA ACGAAATTCG CAAGAATCCA AGTAGCACAC TTACTCGGGA AGAGAGCACA GCGCGACTTG TTAACTGGAA TGGAAGAAAA CCATTTTATT GACATTCTCA GTAAGTACTC AGGTAACAAA ACAACCATAA ATCCTGGAGT AGTTTGCGCA GGTTGGAGTG GCATAGTCGT TGGAAATGGA ATTCTAACCC AGAAACGAAG CAGAAGTCCA TCAGAGGCCT TTGTAATTAG AGGTGAGCAC GAAGGCAAGT TGTACGATGC CAGGATCAAA GTCACGAGGA CAATGAGTCA CAAGATTGTG CACTTTAGTG CAGCAGGAGC CAACTTCTGG AAAGGCTTCG ACAGATGCTT TCTCGCATAC CGTAGTGACA ATCGCGAGCA TACATGCTAT TCAGGGCTAG ATGTCACTGA GTGCGGCGAG GTGGCAGCAC TGATGTGTTT GGCTATGTTC CCATGCGGAA AGATAACCTG CCCTGACTGT GTAACAGATA GTGAGCTATC CCAAGGACAA GCAAGCGGAC CATCTATGAA GCACAGGTTG ACACAGCTAC GCGATGTCAT CAAGTCAAGC TACCCACGCT TCAAGCATGC AGTGCAGATA CTAGATAGGT ATGAGCAATC ACTGAGCAGT GCAAACGAGA ACTACCAAGA TTTCGCAGAA ATCCAGAGCA TAAGCGATGG AGTTGAAAAA GCTGCATTCC CACACGTCAA CAAGCTAAAC GCAATATTGA TCAAAGGGGC CACAGTAACA GGAGAGGAAT TCTCGCAGGC TACGAAGCAC TTGCTCGAGA TAGCACGATA CCTGAAGAAC AGAACCGAGA ACATTGAGAA GGGTTCACTG AAGTCCTTTC GCAACAAGAT TTCCCAGAAA GCGCACATCA ACCCAACACT AATGTGTGAC AACCAGCTCG ATAGAAATGG AAATTTCATA TGGGGTGAGA GAGGATACCA TGCAAAACGA TTCTTCAGCA ACTACTTTGA AATAATCGAT CCAAAGAAAG GCTACACCCA ATACGAGACA AGAGCGGTAC CAAATGGGTC ACGGAAACTT GCAATCGGCA AACTAATAGT CCCAACGAAC TTCGAAGTTT TAAGGGAACA GATGAAAGGC GAACCGGTAG AACCATACCC AGTAACAGTC GAGTGTGTGA GCAAGTTACA GGGTGACTTC GTCCATGCAT GTTGTTGTGT CACAACAGAA TCAGGCGACC CAGTCTTGTC TGAGATCAAA ATGCCAACCA AACACCATCT AGTGATTGGT AACAGCGGTG ATCCAAAGTA CATAGATCTC CCTGAGATCG AGGAGAATAA AATGTACATA GCGAAAGAAG GTTATTGTTA CATCAATATC TTCCTAGCCA TGTTGGTAAA TGTCAAGGAG TCGCAGGCAA AGGAGTTCAC GAAAGTTGTT AGGGACAAAC TAGTTGGCGA ACTTGGCAAG TGGCCCACTC TGTTAGATGT AGCAACCGCT TGTTATTTCC TGAAAGTATT TTACCCAGAC GTTGCTAACG CCGAATTGCC ACGCATGCTA GTGGACCATA AGACAAAGAT AATTCATGTC GTTGATTCAT ATGGGTCACT GTCAACTGGA TATCATGTCC TTAAGACAAA CACTGTGGAA CAACTCATCA AATTCACGAG ATGTAATTTG GAGTCAAGCT TGAAACACTA CCGCGTTGGA GGAACAGAAT GGGAGGACAC TCATGGATCC AGCAACATAG ATAATCCACA GTGGTGCATC AAGAGGCTCA TAAAAGGAGT CTACAAACCA AAGCAACTGA AAGAAGACAT GTTGGCAAAC CCTTTCTTAC CACTATATGC TCTACTGTCA CCAGGTGTCA TCCTGGCATT TTACAATAGT GGCTCTCTAG AGTACTTGAT GAACCATTAC ATCAGGGTGG ACAGCAACGT CGCCGTTTTG TTGGTCGTTT TGAAATCTCT AGCGAAGAAG GTGTCAACTA GTCAGAGTGT GTTAGCCCAG CTTCAAATCA TTGAACGAAG TCTACCAGAA CTCATCGAAG CAAAGGCTAA TGTTAATGGG CCAGATGACG CAGCCACTCG CGCGTGTAAC AGATTCATGG GCATGCTTCT GCATATGGCA GAACCAAACT GGGAGCTTGC GGATGGTGGA TACACAATTC TGAGGGATCA TAGCATCTCC ATTTTGGAAA AAAGTTATCT ACAAATCTTG GACGAAGCAT GGAACGAGTT AAGTTGGTCG GAGCGCTGTG CTATAAGATA CTACTCGTCA AAGCAAGCAA TCTTTACACA GAAAGATTTG CCAATGAAAA GCGAAGCCGA TTTAGGCGGC AGATACAGCG TGTCAGTCAT GTCATCTTAC GAACGGAGTA AGCAATGTAT GAAAAGCGTG CACTCTAGTA TAGGTAATAG ATTACGTAGT AGTATGTCTT GGACTAGTAG CAAGGTGTCG AATAGTGTGT GTAGGACTAT TAACTATTTA GTACCAGATG TGTTCAAGTT TATGAATGTA CTCGTTTGTA TCAGCTTACT AATCAAGATG ACTGCCGAGG CGAATCACAT CGTCACCACG CAAAGAAGGC TCAAACTAGA TGTCGAGGAG ACAGAGCGCA GGAAAATAGA ATGGGAGCTT GCATTCCACC ATGCCATTCT GACGCAGAGT GCAGGTCAAC ACCCAACGAT AGACGAGTTC AGAGCGTACA TCGCCGACAA GGCACCACAT CTAAGTGAGC ATATCGAGCC TGAAGAAAAG GCGGTGGTTC ATCAAGCGAA GAGACAATCC GAGCAAGAAC TCGAGCGTAT AATAGCATTT GTTGCATTGG TGCTCATGAT GTTCGATGCA GAACGAAGCG ACTGTGTCAC AAAGATTCTC AACAAGCTTA AGGGACTAGT CGCCACTGTG GAACCTACAG TCTACCATCA GACTCTCAAT GATATAGAGG ATGACTTGAG TGAGAGGAAC CTCTTCGTCG ATTTTGAGCT TAGCAGCGAT GGAGATATGC TCCAACAGCT TCCAGCCGAA AAGACATTTG CCTCATGGTG GAGTCATCAA CTAAGCAGAG GATTCACAAT CCCACACTAC AGGACAGAAG GGAAGTTCAT GACTTTCACC AGAGCAACTG CCACGGAAGT CGCGGGTAAA ATAGCACACG AGAGTGACAA AGACATATTA CTAATGGGAG CAGTAGGATC AGGTAAGTCA ACTGGCTTGC CATATCATCT CTCCAGAAAA GGGAACGTAT TACTCCTTGA GCCGACTCGG CCACTTGCAG AAAACGTACA CAAGCAGTTG TCGCAGGCAC CGTTCCATCA GAACACAACT CTTAGGATGC GCGGACTAAC AGCATTCGGG TCGGCACCAA TCTCAGTGAT GACCAGTGGT TTTGCACTCA ATTACTTTGC AAACAACAGA ATGCGAATTG AAGAATTTGA CTTTGTCATA TTTGATGAAT GTCACGTTCA TGACGCCAAT GCAATGGCGA TGAGATGTTT GCTACATGAG TGTGACTATT CTGGCAAAAT TATCAAAGTT TCAGCCACAC CACCAGGTCG AGAAGTTGAG TTCTCCACTC AATACCCCGT GTCGATAAGC ACAGAAGACA CACTATCGTT TCAGGATTTT GTGAACGCAC AGGGTAGTGG AAGCAATTGT GATGTGATTT CAAAAGGAGA CAATATCCTC GTGTATGTAG CAAGCTACAA TGAGGTAGAC GCGCTTTCAA AACTTCTAAT TGAAAGAGAC TTCAAAGTCA CGAAGGTTGA TGGAAGAACG ATGAAAGTTG GAAACATCGA GATCACCACA AGTGGAACAC CTAGTAAGAA GCACTTCATA GTTGCAACCA ACATCATAGA GAACGGTGTT ACTCTAGACA TCGATGTGGT TGCTGATTTT GGAACGAAGG TACTCCCATA TCTTGATACA GACAGCAGAA TGCTGAGCAC AACTAAGACA AGCATCAATT ATGGGGAACG TATCCAAAGG CTAGGAAGAG TCGGAAGGCA CAAGCCAGGT CACGCTCTGC GAATAGGTCA CACAGAGAAG GGGTTGAGCG AAGTTCCAAG TTGTATTGCA ACAGAAGCAG CTTTAAAGTG CTTCACTTAT GGGCTTCCAG TGATCACCAA CAACGTCTCG ACAAGTATTC TTGGTAATGT AACGGTAAAG CAGGCACGAA CAATGTCTGT ATTTGAGATA ACACCGTTCT ACACAAGCCA AGTGGTGAGA TATGATGGCT CCATGCATCC ACAGGTGCAC GCACTCTTAA AGAGATTCAA ACTCAGAGAC TCTGAGATTG TTTTGAATAA ATTAGCCATA CCTCACCGAG GAGTGAACGC TTGGCTCACA GCTAGTGAGT ATGCACGACT TGGCGCGAAT GTTGAAGATA GGCGTGACGT TCGAATTCCT TTTATGTGTC GCGACATCCC AGAAAAACTT CATCTAGACA TGTGGGATGT GATTGTTAAA TTCAAAGGTG ATGCAGGTTT TGGTCGGCTT TCAAGCGCCA GTGCGAGCAA GGTAGCTTAT ACTCTACAGA CGGACGTCAA CTCCATACAG CGAACAGTCA CTATCATAGA TACACTAATC GCTGAGGAGA GAAGGAAGCA GGAATACTTC AAGACGGTAA CCTCCAACTG TGTCTCTTCT TCGAACTTCT CACTGCAGAG CATAACAAAT GCGATAAAAT CTCGTATGAT GAAAGATCAC ACGTGCGAGA ACATATCAGT GCTTGAAGGA GCGAAGTCAC AGTTACTCGA GTTTAGAAAC CTGAATGCTG ATCACTCATT TGCTACAAAA ACCGATGGAA TATCTCGGCA TTTCATGAGT GAGTATGGAG CTCTTGAGGC AGTTCACCAT CAAAACACCA GCGACATGAG CAAATTCCTC AAGCTTAAGG GCAAATGGAA TAAAACGCTA ATCACGCGAG ATGTGCTGGT ACTTTGTGGA GTTCTTGGAG GTGGATTGTG GATGGTTATT CAGCACCTGC GGTCAAAGAT GTCCGAACCC GTAACCCATG AAGCGAAAGG TAAGAGGCAA AGGCAGAAAC TAAAATTTCG CAATGCCCGA GACAACAAAA TGGGTAGAGA AGTGTACGGA GATGATGATA CCATAGAGCA TTTCTTCGGT GATGCCTACA CAAAGAAAGG GAAGAGCAAG GGTAGGACAC GTGGTATCGG ACACAAAAAC AGGAAGTTCA TCAACATGTA TGGGTTTGAT CCTGAAGATT TCTCTGCAGT TCGTTTCGTG GATCCACTCA CAGGAGCGAC GTTGGACGAC AACCCGCTCA CAGACATCAC CCTTGTGCAA GAGCACTTCG GCAACATAAG AATGGACTTA CTCGGGGAGG ATGAGCTGGA CTCAAATGAA ATACGTGTGA ATAAGACTAT TCAAGCCTAC TACATGAACA ATAAAACAGG CAAGGCTTTG AAGGTGGATC TGACACCACA CATACCTCTC AAGGTGTGTG ATCTTCACGC AACCATTGCT GGATTCCCAG AGCGAGAAAA CGAGCTGAGG CAGACTGGAA AGGCTCAGCC CATCAACATA GACGAAGTGC CAAGAGCTAA CAACGAACTC GTCCCAGTGG ACCACGAGAG TAACTCCATG TTCAGAGGGT TGCGTGACTA CAACCCAATA TCAAACAACA TTTGTCATCT CACAAATGTT TCAGATGGAG CATCAAACTC GTTATATGGA GTCGGTTTCG GACCACTCAT ATTAACGAAC CGACACCTCT TTGAGCGGAA TAACGGTGAA CTCGTAATAA AATCACGACA TGGTGAGTTC GTGATTAAAA ACACAACTCA GCTACACTTG CTACCGATTC CAGACAGAGA TCTTCTGCTA ATCCGGTTAC CAAAGGACGT CCCACCCTTT CCACAGAAAT TGGGTTTCAG GCAACCTGAG AAAGGTGAAC GAATTTGCAT GGTGGGGTCC AATTTCCAAA CCAAGAGCAT AACGAGTATA GTCTCTGAGA CTAGTACAAT AATGCCAGTG GAGAACAGTC AGTTTTGGAA ACACTGGATT AGCACTAAAG ACGGCCAATG CGGAAGTCCA ATGGTGAGCA CGAAAGACGG GAAAATACTC GGATTACACA GCCTAGCGAA CTTCCAGAAC TCCATCAATT ACTTTGCTGC TTTCCCAGAT GATTTTGCCG AGAAGTATCT TCATACCATT GAAGCACACG AGTGGGTCAA GCACTGGAAG TATAACACTA GCGCCATCAG TTGGGGCTCT TTGAATATAC AAGCATCGCA ACCGTCCGGC TTGTTCAAAG TAAGCAAGCT AATCTCAGAC CTCGACAGCA CGGCAGTCTA CGCACAAACC CAGCAGAATC GGTGGATGTT CGAGCAGCTC AACGGGAACC TAAAAGCGAT AGCACACTGC CCTAGCCAGC TTGTGACAAA GCACACAGTT AAAGGAAAAT GTCAGATGTT TGACTTGTAT CTCAAGTTGC ATGATGAAGC ACGAGAGTAT TTCCAACCGA TGCTGGGCCA GTATCAAAAG AGCAAACTCA ATCGAGAAGC ATATGCAAAG GATCTTCTGA AATATGCAAC GCCAATCGAA GCAGGAAACA TCGACTGTGA TCTGTTTGAA AAGACAGTTG AAATAGTCGT ATCAGATCTG CGAGGTTATG GTTTCGAAAC ATGCAATTAT GTCACTGATG AGAATGACAT ATTCGAAGCT CTTAACATGA AATCCGCAGT TGGAGCGTTG TATAAAGGAA AGAAGAAGGA TTACTTCGCT GAGTTCACAC CCGAGATGAA AGAAGAAATA CTGAAACAAA GTTGTGAACG GCTCTTCCTA GGAAAGATGG GAGTGTGGAA CGGCTCGCTG AAGGCAGAGT TGCGACCACT AGAAAAAGTG GAAGCAAACA AAACACGGAC GTTTACTGCC GCACCACTAG ACACACTGTT GGGTGGAAAA GTTTGCGTGG ATGATTTCAA CAACCAGTTC TATGATCACA ACCTTAGAGC TCCTTGGAGC GTTGGCATGA CAAAGTTTTA TTGTGGTTGG GATCGCTTGT TGGAGTCGTT GCCAGATGGT TGGGTGTATT GCGATGCTGA TGGCTCACAG TTCGACAGCT CGCTATCGCC ATACTTGATC AACGCAGTAC TCAACATCCG CTTAGGATTC ATGGAAGAGT GGGACATAGG GGAGGTAATG CTGAGAAATT TGTACACCGA AATCGTGTAT ACCCCTATTT CTACACCAGA TGGTACACTC GTCAAGAAGT TCAAAGGAAA CAATAGCGGA CAGCCATCGA CTGTTGTGGA CAACACGCTC ATGGTCATAT TGGCAGTCAA CTATTCACTC AAGAAAAGCG GAATTCCAAG TGAGTTGCGC GACAGCATCA TCAGATTCTT CGTCAACGGA GATGATTTAC TGCTAAGCGT ACACCCAGAG TATGAGTATA TTCTTGACAC TATGGCAGAC AACTTTCGTG AACTGGGCCT GAAGTATACT TTCGACTCAA GAACCAGGGA AAAAGGAGAC CTCTGGTTTA TGTCGCACCA GGGGCACAAA AGAGAGGGAA TCTGGATTCC CAAGCTCGAG CCAGAGCGAA TAGTATCGAT TCTAGAATGG GATCGGTCGA AAGAGCCATG CCATCGACTA GAGGCAATCT GCGCAGCGAT GATTGAGTCG TGGGGATACG ACAAGTTAAC TCACGAGATA CGCAAGTTCT ACGCGTGGAT GATTGAACAA GCTCCATTTA GCTCCCTAGC ACAAGAAGGG AAAGCTCCTT ACATAGCGGA AACAGCGCTG AGGAAGCTCT ACCTTGATAA GGAACCAGCT CAAGAGGATC TCACCCATTA TTTGCAAGCA ATCTTTGAGG ATTATGAAGA TGGTGCTGAG GCTTGTGTTT ATCACCAGGC AGGTGAAACG CTTGATGCAG GTTTGACAGA CGAGCAAAAG CAGGCAGAGA AGGAGAAGAA GGAGAGAGAG AAGGCAGAAA AGGAACGAGA GAGGCAAAAG CAGTTGGCAC TCAAGAAAGG CAAGGATGTT GCACAAGAAG AGGGAAAACG CGACAAGGAA GTAAACGCTG GAACCTCTGG AACTTTCAGT GTACCCAGAC TCAAGAGTCT GACAAGCAAG ATGCGCGTGC CAAGATACGA GAAAAGAGTG GCTCTAAACC TCGATCATCT AATCCTATAC ACGCCGGAGC AGACGGATCT ATCCAACACA CGTTCAACGC GAAAGCAGTT TGACACATGG TTTGAAGGTG TAATGGCTGA TTACGAACTG ACGGAGGACA AAATGCAAAT CATTCTCAAT GGTTTAATGG TCTGGTGCAT TGAGAACGGA ACCTCCCCGA ACATAAACGG AATGTGGGTG ATGATGGACG GCGACGATCA GGTGGAATTC CCGATCAAAC CGCTCATTGA CCACGCCAAA CCCACATTTA GGCAGATAAT GGCCCATTTC AGTGACGTAG CTGAAGCGTA CATTGAAAAG CGTAACCAAG ACCGACCATA CATGCCACGA TATGGTCTTC AGCGCAATTT AACCGACATG AGCTTAGCTC GATACGCATT TGATTTCTAT GAAATGACTT CTAGGACTCC AATACGTGCG AGAGAGGCAC ACATCCAGAT GAAAGCAGCA GCACTGCGTG GCGCAAATAA TAATTTGTTC GGCTTGGATG GAAACGTTGG TACAACGGTA GAGAACACGG AGAGGCATAC GACCGAGGAC GTTAATCGGA ACATGCATAA CTTACTGGGC GTTCAGGGGT TGTGAAGTTG TATGCTGGTA GACTATAAGT ATTTAAGTTT ACTCGTTAGT ATTCTCGCTT ATGGGAAATA TGTAAGTTTG TTAAAGCAGC CAGTGTGACT TTGTCATGTG TGTTGTTGTT ACTTTCTGTA TTTTCGCCGA ACATTTTATT GGTGTTAGCG CATGTAGTGA GGATCGTCCT CGATTGCCTT AACATTTGAT AGGATGCAAG GGACA 
Length9835
Protein Sequence
Protein Residue
A.thaliana
AGI-code
Description
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
2.82843 Virus2917
4 Ahg473645 Argonaute family protein
4 Virus2930
4.89898 Virus3821
5.47723 Virus3363
5.47723 Virus3631
5.65685 Virus3106
6.32456 Virus3842
7.93725 Virus3714
8.66025 Virus3415
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression