Detail



ID : Ahg359798

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|359798|fgenesh1_pg.C_scaffold_1072000001
Sequence
ATGATGATAA GACTAATTAA GATTGCTTCT ACTCTGCAGA GGGAACAAAG CTTGAGGAAT AATAAAGCAA TTATTCGAGC TCAAGCAATC GCGACTTCAA CACCATCGGT CACAAAATCG TCCTTAGACC GCAAGAAAAC CCTTAGAAAA GGAAACGTGG TTGTCACGGG AGCTTCTTCA GGGTTAGGGT TAGCAACGGC AAAGGCATTA GCCGAGACAG GTAAATGGCA CGTGATAATG GCGTGCAGAG ACTTCCTCAA GGCTGAGAGA GCCGCTCAAT CCGCTGGCAT GCCTAAGGAC AGCTACACTG TGATGCATTT GGACTTAGCG TCTTTGGACA GCGTGAGGCA GTTCGTTGAT AACTTCAGGC GAGCCGAGAT GCCTCTCGAT GTGTTGGTCT GCAATGCTGC GGTTTATCAG CCAACAGCTA ATCAACCTAC TTTCACTGCT GAAGGGTTTG AGCTTAGCGT TGGGATAAAC CATTTGGGCC ACTTTCTTCT TTCAAGATTG TTGATTGATG ACTTAAAGAA CTCCGATTAT CCATCAAAAC GTCTCATCAT TGTTGGATCC ATAACCGGAA ATACTAATAC ATTGGCGGGT AATGTACCTC CGAAGGCGAA TCTTGGTGAT TTGAGGGGAT TAGCAGGTGG GTTGAACGGG CTAAACAGCT CGGCGATGAT AGATGGAGGA GATTTCGTTG GGGCAAAGGC GTATAAAGAT AGCAAAGTCT GCAACATGTT GACAATGCAA GAGTATCATA GGCGTTTCCA TGAAGACACC GGCATAACTT TTGCTTCCCT GTACCCCGGT TGTATCGCGA CAACTGGTTT GTTCAGAGAA CATATACCTC TCTTCCGTAC CCTCTTCCCT CCTTTCCAGA AGTACATCAC AAAAGGTTAC GTCTCCGAGA CAGAGGCTGG GAAAAGACTT GCTCAGGTGG TGGGTGACCC AAGCTTGACG AAGTCGGGAG TGTATTGGAG CTGGAACCAA GACCTCGGCT TCATTTGA 
Length1008
Protein Sequence
Protein Residue
Map Locationscaffold_1072: 154.. 1369
Download Sequence
A.thaliana
AGI-codeAT5G54190.1
Descriptionprotochlorophyllide oxidoreductase A
TAIR curator summarylight-dependent NADPH:protochlorophyllide oxidoreductase A
Alias[PORA][protochlorophyllide oxidoreductase A]
Gene coexpression
MR
MR Locus Description
25.2389 Ahg919315 delta 9 desaturase 1
34.9428 Ahg470654 Fatty acid desaturase family protein
53.8052 Ahg481373 HXXXD-type acyl-transferase family protein
53.8331 Virus3947
53.8331 Virus0819
54.6809 Ahg949811
55.5698 Ahg350051 glucan endo-1,3-beta-glucosidase-like protein 3
56.6569 Ahg486063 transcription regulators
57.9914 Ahg931484
58.5064 Ahg932484 SMAD/FHA domain-containing protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression