Detail



ID : Ahg932484

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|932484|scaffold_400472.1
Sequence
TTTAAAGAAT CAACATATCC AAATGTTTTA CAAAACAAGA AAACCCAACG ACAGATGGAG GAGACTTTAT GTTTTAAAAG ATGGTGAACC ACTGAATGAG CCACTCTGCA TTCATTACCA AAGCTGCTAC CTCTTTGGAC GTGAGAGAAA GATCGCCGAC ATTCCTACTG ATCACCCATC TTGTAGCAAG CAACATGCTG TTATTCAGTA CCGCGAGGTG GAAAAAGAGA AACAACCAGA AACAAACAAC CAAGTGAGGC CTTACATTAT GGATCTTGGT AGTACCAATA ATACTTACAT CAACGAAACT CCGATTGAGC CACAACGGTA CTACGAGCTT TTTGAGAAAG ATACCATAAG ATTTGGCAAC AGAAGCCAAG AGTACGTACT GCTGAGTGAA TGAAATCAGA GTCAAGTATC AACG 
Length424
Protein Sequence
Protein Residue
Map Locationscaffold_4: 2626653.. 2627016
Download Sequence
A.thaliana
AGI-codeAT3G20550.1
DescriptionSMAD/FHA domain-containing protein
TAIR curator summaryEncodes a nuclear localized FHA (forhkead) domain containing protein.Mutant plants have shortened roots, delayed flowering time, altered floral organ number, defective floral organs and reduced fertility.Ddl mutants also show reduced levels of pri-miRNAs as well as mature miRNAs suggesting involvement in biogenesis of miRNAs. DDL does not affect transcription of miRNAs directly but may act through other proteins such as DCL.
Alias[DDL][DAWDLE]
Gene coexpression
MR
MR Locus Description
4.79583 Ahg947208
9.38083 Virus3593
9.38083 Ahg928601 Transmembrane amino acid transporter family protein
9.79796 Virus1870
10.4881 Ahg915162
13.4164 Ahg952451
17.1756 Ahg942312
17.5499 Virus3044
23.6854 Ahg908198 Pentatricopeptide repeat (PPR) superfamily protein
23.9165 Ahg925880
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression