Detail


ID : Ahg470335

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|470335|fgenesh2_kg.1__289__AT1G03630.1
Sequence
TCGGCGAAAC TCGAAGACAC TGTGACACTC TAGCACCTTC AGTTCCGTAC AACAATGGCG CTCCAAGCGG CCTATTCTCT TCTTCCTTCA ACCATTTCAA TCCAAAAAGA GGGCAAATTC AATGCTTCTC TAAAGGAGAC GACTTTAACT GGTTCTTCAT TTTCCAACCA TCTTAGAGCC GACAAGATCT CCACACTGTT AACCATCAAG GAACAGAGAA GACAAAAGCC GCGACTTTCT ACCAGTATTC GTGCACAGAC AGTTACAGCC ACGCCGCCGG CAAGCGAGGC ATCCCCGGAG CAAAAGAAGA CTGAGAGAAA AGGCACTGCA GTTATCACTG GAGCTTCGTC TGGTTTAGGT TTAGCTACGG CCAAAGCTTT AGCAGACACA GGGAAATGGC ATGTGATCAT GGCTTGTAGG AACTTTCTCA AGGCCGAGAA AGCAGCGAGA TCTGTAGGAA TGTCTAAGGA AGATTACACT GTGATGCATC TTGATCTTGC TTCGCTTGAA AGCGTGAAGC AGTTCGTTGA AAATTTCCGG AGAACAGAAC AACCCCTCGA TGTTCTTGTC TGCAATGCTG CGGTTTACCA ACCAACTGCT AAAGAACCAT CTTTTACAGC TGAAGGCTTT GAGCTAAGCG TTGGAACCAA CCATCTCGGT CACTTTCTTC TTTCAAGATT GCTTCTTGAT GACCTGAAAA AATCGGATTA TCCATCAAAA CGTATGATCA TCGTAGGATC TATAACAGGA AACACAAATA CTTTGGCTGG AAATGTACCG CCAAAGGCAA ACCTTGGTGA CCTAAGAGGC TTAGCATCAG GATTGAATGG GCAAAACAGT TCAATGATAG ATGGAGGAGA GTTTGATGGA GCAAAGGCTT ACAAAGACAG CAAAGTCTGC AATATGTTGA CAATGCAGGA GCTTCACAGA CGTTACCACG AGGAAACCGG AGTCACGTTT GCCTCTCTTT ACCCTGGTTG CATTGCTACA ACAGGGTTGT TCAGAGAACA CATACCGTTG TTTCGGCTTC TTTTTCCGCC TTTTCAAAAG TATATCACCA AAGGTTATGT ATCTGAAGAG GAAGCTGGGA AAAGACTAGC ACAGGTTGTG AGTGACCCTA GTCTTGGAAA GTCAGGAGTG TATTGGAGCT GGAACAATAA CTCGTCTTCG TTTGAGAATC AGCTCTCTAA AGAAGCAAGT GATGCAGAGA AGGCAAAGAA ACTGTGGGAG GTTAGCGAGA AGCTTGTTGG TTTGGCTTGA AATTAAGATT TTTGATATTC AAATTCATAT AGGTTACTAT GTTTCTTGAC ATGTACCATA ACTATCAAGC AGAACAATAT AT
Length1342
Protein Sequence
Protein Residue
Map Locationscaffold_1: 1015403.. 1017084
Download Sequence
A.thaliana
AGI-codeAT1G03630.1
Descriptionprotochlorophyllide oxidoreductase C
TAIR curator summaryEncodes for a protein with protochlorophyllide oxidoreductase activity. The enzyme is NADPH- and light-dependent.
Alias[POR C][PORC][protochlorophyllide oxidoreductase C]
Gene coexpression
MR
MR Locus Description
7.34847 Ahg491143 plasma membrane intrinsic protein 3
8.94427 Ahg492755 photosystem II subunit QA
12.2474 Ahg490167 photosystem II subunit Q-2
16.1555 Ahg474340 photosystem I subunit H2
17.8885 Ahg491882 Photosystem I reaction centre subunit IV / PsaE protein
18.5472 Ahg923621 Photosystem II 5 kD protein
18.868 Ahg483083 ferritin 4
19.0788 Ahg492423 chloroplast heat shock protein 70-1
21.0238 Ahg497470
21.0238 Ahg482253
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression