Detail



ID : Ahg490167

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|490167|fgenesh2_kg.6__3301__AT4G05180.1
Sequence
GTCACATAAC CAAACACCAA AAATTATAAC TCAACAATCT TCACTAATCA AATTATTCAA AGCAGATAAA AAAATGGCTC AAGCAGTGAC TTCGATGGCT GGCTTACGTG GCGCATCTCA GGCTGTCCTT GAAGGAAGTC TACAGATCAA TGGCTCAAAC CGTTTGAACA TCTCAAGAGT CACGGTTGGA TCTCAAAGAA CCGGACTTGT GATCAGGGCT CAGCAGAACG AGTCAGTACC AGAAAGTAGT CGCAGGTCAG TGATCGGGCT CGTGGCGGCT GGTTTAGCCG GTGGTTCATT CGTTAAAGCT GTTTTCGCCG AAGCTATTCC GATCAAAGTT GGTCCTCCTC CACCTCCTTC CGGTGGCCTA CCTGGAACAG ATAACTCAGA CCAAGCAAGA GATTTTTCAT TGGCATTGAA AGACAGATTT TACATACAAC CATTGTCACC AACAGAAGCT GCAGCTAGAG CCAAAGAATC TGCTAAAGAG ATCATTAACG TTAAGTCACT GATCGACAAA AAAGCTTGGC CTTACGTTCA GAACGATCTC CGTTTAAGAG CATCGTACCT TCGTTACGAT CTTAACACCG TTATCTCCGC TAAGCCTAAA GAAGAGAAAA AGAACCTTAA AGAACTTACC GGCAAGCTCT TCGAAACCAT CGACAACTTG GACTATGCGG CGAGGTCTAA GAGCAGCCCA GATGCTGAGA AGTATTACTC AGAAACTGTC TCGAGTTTGA ACAATGTTCT TGCCAAGCTT GGTTAATGAA GAAAGATTTG CTTTGTAATG TGTTGATGTC GATGTTATTA TTATTATTAC TATCCAAGTA CTTTGTCTTT CTCCTCCTCT TCTTAATTAT CTGATCAAAT CGGTTATTTC TAATTTCAGT TTC 
Length893
Protein Sequence
Protein Residue
Map Locationscaffold_6: 21465905.. 21467414
Download Sequence
A.thaliana
AGI-codeAT4G05180.1
Descriptionphotosystem II subunit Q-2
TAIR curator summaryEncodes the PsbQ subunit of the oxygen evolving complex of photosystem II.
Alias[PSBQ][PSBQ-2][PSII-Q][PHOTOSYSTEM II SUBUNIT Q][photosystem II subunit Q-2]
Gene coexpression
MR
MR Locus Description
1.73205 Ahg470689 photosystem II subunit P-1
2 Ahg491882 Photosystem I reaction centre subunit IV / PsaE protein
3 Ahg485048 plastid transcriptionally active 16
3.16228 Ahg474626 photosystem I subunit G
3.74166 Ahg492755 photosystem II subunit QA
5.74456 Ahg915184 photosystem I subunit l
6 Ahg473640 photosystem I subunit F
6.48074 Ahg486624 photosystem I light harvesting complex gene 2
7.61577 Ahg923621 Photosystem II 5 kD protein
9.79796 Ahg489877 light harvesting complex of photosystem II 5
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression