| Annotation |
|---|
| Description | jgi|Araly1|470916|fgenesh2_kg.1__870__AT1G08550.1 |
| Sequence |
TGGAGAAAAC AAGCGCCTAG GACAAAAATG TGGGTAGAGG AGGAGGCGGC TTCGTTCACA CACCACACGA CGGAACACTC TCTTCCAAGC CTTATCCAAA GCAAAGCATA TTTTTCTTAA ATATCTTCTT CTCCGTCTCT GTCTCTCTTC TTCCCGCGGA GCTTTCAATC TTTGCTTGGT AACATGCTTG GCTTGGGGAA GATTAGAGAG TAAAGCTAAT GGCAGTAGCT ACACATTGTT TCACTTCACC TTGTCATGAC CGTATTCGGT TTTTCTCAAG TGATGATGGT AGGCTTGGCA TTACAAGAAA GAGGATCAAT GGCACTTTCT TGCTCAAGAT TTTACCTCCA ATCCAAAATG CTGGGGGGAG ATCCTCACGC CCTATATCTG CATTCAGGTC AGGATTCTCT AAGGGGATAT TTGACATTGT GGCAGTACCA TCAAAAAATG AACTCAAGGA GCTGACCACT CCACTCTTGC TAAAACTCGT GGGTGTTTTA GCCTGCGCCT TCCTCATTGT TCCATCTGCA GACGCAGTTG ATGCACTTAA GACTTGTGCA TGCTTATTGA AGGGATGCAG GATAGAACTC GCAAAGTGCA TTGCCAACCC TGCCTGCGCA GCCAATGTCG CATGCCTCCA GACCTGTAAT AACCGTCCAG ATGAAACCGA GTGCCAGATC AAATGCGGGG ATCTTTTCGA AAACAGTGTA GTTGATGAGT TCAACGAGTG TGCTGTGTCG AGAAAAAAGT GTGTTCCTAG AAAATCTGAT CTCGGAGAAT TTCCTGCCCC AGACCCTTCT GTTCTTGTCC AGAACTTCAA CATCTCCGAC TTTAACGGGA AGTGGTACAT TACAAGTGGC TTGAATCCAA CCTTTGATGC CTTCGACTGC CAGCTGCATG AGTTCCACAC AGAAGGTGAC AACAAGCTTG TTGGAAACAT CTCCTGGAGA ATAAAGACCC TAGACAGTGG ATTCTTTACT AGGTCAGCTG TACAAAAATT CGTGCAAGAT CCTAACCAAC CTGGTGTTCT CTACAATCAT GACAACGAGT ACCTTCACTA TCAAGATGAC TGGTATATCC TGTCATCAAA GATAGAGAAT AAACCTGAAG ACTATATATT TGTATACTAC CGTGGACGAA ACGATGCTTG GGATGGATAT GGTGGTGCAG TTGTATACAC GAGAAGTTCT GTATTACCCA ATAGCATTAT ACCAGAGCTA GAAAAGGCAG CAAAAAGCAT AGGCAGAGAC TTCAGTACAT TCATTAGAAC AGATAACACA TGTGGTCCTG AACCTCCACT CGTAGAAAGA ATTGAGAAGA CAGTAGAAGA AGGGGAAAGG ATAATCGTAA AAGAGGTTGA AGAGATAGAA GAGGAAGTAG AGAAGGAAGT GGAGAAAGTT GGTAAGACTG AGATGTCCTT GTTCCAGAGA TTGGCTGAAG GATTTAACGA ACTGAAGCAA GACGAGGAGA ATTTCGTGAG AGAGTTCAGT AAAGAAGAGA TGGAGTTTTT GGATGAGATC AAAATGGAAG CAAGTGAGAT TGAAAAATTG TTTGGTAAAG CTTTGCCAAT TAGGAAGGTC AGGTAGAACC AAGAACCACC ATTGTTGTCC AAACTATATT ATACATACTG TGTTCAGTTC ATATAAAGTA ATATTTTTGT ACACATTCAT CAT |
| Length | 1673 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_1: 3060671.. 3063108 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G08550.1 |
| Description | non-photochemical quenching 1 |
| TAIR curator summary | Violaxanthin deepoxidase involved in xanthophyll cycle.Two major consequences of the npq1 mutation are the absence of zeaxanthin formation in strong light and the partial inhibition of the quenching of singlet excited chlorophylls in the photosystem II light-harvesting complex |
| Alias | [AVDE1][NPQ1][ARABIDOPSIS VIOLAXANTHIN DE-EPOXIDASE 1][non-photochemical quenching 1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 5.91608 |
Ahg487479 | WCRKC thioredoxin 1 |
| 7.34847 |
Ahg491684 | Translation initiation factor 3 protein |
| 9.79796 |
Ahg471134 | GATA type zinc finger transcription factor family protein |
| 10.9545 |
Ahg489312 | 30S ribosomal protein, putative |
| 12.0416 |
Ahg492054 | COP1-interacting protein 7 |
| 12.6491 |
Ahg317356 | with no lysine (K) kinase 1 |
| 13.9284 |
Ahg472228 | ferredoxin-NADP(+)-oxidoreductase 2 |
| 14.9666 |
Ahg327181 | Beta-glucosidase, GBA2 type family protein |
| 18.3848 |
Ahg482500 | glycine decarboxylase complex H |
| 18.7083 |
Ahg930731 | |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|