Detail



ID : Ahg472228

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|472228|fgenesh2_kg.1__2182__AT1G20020.3
Sequence
ACGAGATACT CTCTTCTACA AACCTCATCC ACCCAAACAC AAATGTCTTC TAATCCTTCT CTTATCTTTC TCCTTCTGAT TCCTTTTTAT ATTCCTCTGA TTTTTTCTCT CAATTTGATT TCATTTGCTC TGCAATGGCT ACTACCATGA ATGCTGCTGT TTCTCTCACA TCTTCAAACT CTTCTTCGTT TCCCGCTACA AGTTGTGCCA TTGCTCCTGA AAGGATCAGG TTTAGTAAGG GTGCTTTTTA CTACAAAAGC AACAATGTAG TGACAAGTAA AAGAGTGTTT TCCATAAGAG CACAAATCAC AACAGAAACA GATACTCCTA CTCCTGCCAA GAAAGTTGAG AAAGTGTCAA AGAAGAATGA GGAAGGTGTG ATTGTTAATA GGTACAGACC AAAGGAGCCT TACACTGGAA AATGCCTTCT CAACACCAAA ATCACAGCTG ATGATGCTCC TGGAGAGACC TGGCACATGG TTTTGAGCCA TGAAGGAGAA ATCCCGTACA GAGAAGGACA ATCTGTTGGT GTGATTGCAG ATGGAATTGA CAAGAATGGA AAGCCTCACA AGGTCAGACT TTACTCGATA GCGAGCAGCG CTCTTGGAGA TCTCGGCAAT TCTGAAACCG TTTCTTTGTG TGTGAAAAGA CTTGTCTATA CTAATGACCA AGGAGAGACT GTTAAAGGAG TTTGCTCAAA TTTCTTGTGT GATTTGGCAC CCGGAAGTGA TGTTAAGCTG ACTGGTCCTG TAGGCAAAGA AATGCTTATG CCAAAGGATC CAAACGCCAC TGTTATTATG CTTGCCACAG GGACAGGAAT TGCTCCTTTC CGGTCTTTCT TATGGAAGAT GTTCTTTGAG AAACATGATG ACTACAAGTT CAATGGCTTA GCTTGGTTGT TCTTGGGTGT ACCAACCACT AGCTCATTGC TCTACCAAGA GGAGTTTGAT AAGATGAAAG CAAAGGCCCC CGAGAACTTC AGGGTGGATT ACGCGATAAG CAGAGAACAA GCGAACGATA AAGGAGAGAA AATGTATATC CAGACTCGGA TGGCGCAGTA CGCAGCTGAA CTATGGGAGT TGTTGAAGAA AGACAACACT TTTGTTTACA TGTGTGGACT CAAGGGAATG GAGAAAGGAA TTGATGACAT TATGGTCTCA TTGGCTGCAA ATGACGGTAT TGACTGGTTT GACTATAAGA AGCAGTTGAA GAAGGCAGAG CAATGGAACG TTGAAGTCTA CTGATCAGAA GCCCTATGAC ATTCTATAGC AAGTATAGCT GAACAAAACT GTAATTCTCT GCTTCCGAAA TTCTGTAATG TGAAGATAAG TTTTTTTAGA TATATTATAC TAAAAAAAGA GTTCTTTAAT CA 
Length1372
Protein Sequence
Protein Residue
Map Locationscaffold_1: 8151000.. 8153367
Download Sequence
A.thaliana
AGI-codeAT1G20020.1
Descriptionferredoxin-NADP(+)-oxidoreductase 2
TAIR curator summaryEncodes a leaf-type ferredoxin:NADP(H) oxidoreductase. It is present in both chloroplast stroma and thylakoid membranes but is more abundant in the stroma
Alias[ATLFNR2][FNR2][LEAF FNR 2][ferredoxin-NADP(+)-oxidoreductase 2]
Gene coexpression
MR
MR Locus Description
3.16228 Ahg496993 ferredoxin-NADP(+)-oxidoreductase 1
3.4641 Ahg490231 photosynthetic electron transfer C
4.24264 Ahg950127 thiazole biosynthetic enzyme, chloroplast (ARA6) (THI1) (THI4)
8.66025 Ahg490821 serine transhydroxymethyltransferase 1
9.05539 Ahg482500 glycine decarboxylase complex H
9.53939 Ahg492575 PGR5-LIKE A
11.4891 Ahg473747 glyceraldehyde-3-phosphate dehydrogenase B subunit
11.6189 Ahg478862 Aldolase-type TIM barrel family protein
12 Ahg470338 thioredoxin M-type 1
13.9284 Ahg470916 non-photochemical quenching 1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression