Detail



ID : Ahg471002

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|471002|fgenesh2_kg.1__956__AT1G09160.2
Sequence
TTTCTTCCCA ATCTGAGAAA ATCCACAAAA CTCACTCTGC AACCTTCGTT TCTCTTCTTC TTTCTAAAAC CTCTCACGCG GTTTCAGACT TCCGTTCGAT TACCGACGAC GGCTCGGAAA TTCTCTCCGG AGAAGCAGCG AGGTCCTTAG CATTATCTAC GAGTCATCTT CTCTGCTAGA TCTGTTTTGT ATGCTACTCG CGATTTCATT TTGGTGATTT GTTCCAGCCA ATGCTGAAGG CTAGACTAAA ATGAGCGTGT CAAAAGCATC GAGGACTACA CATTCGCTTG TTCCTCTTGC TACCCTGATT GGTGGGGAGC TGAGGAGCGA GAAAGTAGAG AAGCCTTTTG TCAAGTATGG TCAAGCTGCT CTCGCTAAGA AAGGAGAGGA CTACTTTTTG ATCAAAACTG ACTGTGAGAG GGTACCTGGT GATCCATCAT CAGCTTTTTC AGTTTTCGGG ATATTTGATG GACACAATGG TAATTCAGCT GCCATATATA CTAAGGAACA TCTTCTAGAG AACGTGGTGA GTGCAATTCC TCATGGCGCT AGCAGGGAAG AGTGGCTTCA AGCTCTTCCT AGGGCTTTAG TTGCAGGCTT TGTCAAAACT GACATAGAAT TTCAGCAGAA AGGGGAAACT TCAGGAACAA CCGTGACTTT TGTTATAATT GATGGTTGGA CTATCACTGT TGCTTCTGTT GGTGACTCAC GCTGCATATT AGACACCCAA GGTGGTGTGG TTTCTCTGCT GACTGTTGAT CACAGGCTAG AAGAGAATGT TGAAGAGAGA GAACGCATAA CTGCCAGTGG AGGTGAGGTC GGAAGGCTCA ATGTATTTGG TGGCAATGAG GTCGGCCCAC TACGATGCTG GCCTGGTGGT TTGTGTCTTT CGAGGTCCAT TGGTGATACG GATGTGGGAG AATTCATTGT CCCTATACCA CACGTTAAGC AAGTGAAACT TCCAGATGCT GGAGGGAGAC TCATCATAGC TTCAGATGGT ATATGGGATA TACTGTCTTC TGATATGGCT GCCAAAGCTT GCCGTGGTTT ATCTGCCGAG CTTGCTGCTA AACTTGTTGT TAAGGAAGCA TTGAGAACTA AAGGGTTGAA GGATGATACG ACTTGTGTAG TTGTTGACAT AGTTCCATCT GGTCATCTTT CCTTGGCTCC AGCACCCATG AAGAAGCAGA ATGCATTCAC CTCATTCCTT TCTAGGAAAA ACCATAGGGA TACCAACAAC AAAAATGGCA ACAAGCTTTC TGCTGTGGGA GTTGTAGAAG AATTGTTTGA AGAAGGTTCT GCTGTACTTG CAGATAGATT GGGAAAGGAT CCTCCCTCAC ATACGGAAAC TGGGCTCTTA AAATGTGCTG TATGCCAAAC CGATGAATTT CCGGGTGAAG ATTTATCAAG CAATGGGGGT TCCATCATTT CCTCAGCATC TAAACGATGG GAAGGTCCCT TTCTGTGCAC AATATGCAAG AAAAAGAAAG ACGCCATGGA AGGAAAAAGA CCAAGCAAAG GTTCAGTGAC TACTTGAAGC CACTTGTGTG CAGGAAAAAG AAATCAGAAT CAGGCATTGA TTGGAAAGTA GTGGTAATAG TAGAAGTGTA TGCAAATGTT TGTAGAGAGA GAGAGAGAGA GAGAGAGAAT AGATCCAATT CTTATCCATT GTTTAAGATT TCCCTGGATT GCATTCTTGG CTTTATGCTG ACCATTTACC TTCGTAGATG TGTTTTTGTT TGGGAAATTG CTGATATTCT AACAAGAGTT TCCAAGTTGT AAGTAGAATT CATATTTTTG ATTATTGTCA ATCCTATTGC ACCCATTCAT TGAAGTTTAT TTCGGTTTAT AT 
Length1852
Protein Sequence
Protein Residue
Map Locationscaffold_1: 3325537.. 3328412
Download Sequence
A.thaliana
AGI-codeAT1G09160.2
DescriptionProtein phosphatase 2C family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
10.4881 Ahg334100 lactoylglutathione lyase family protein / glyoxalase I family protein
12.3693 Ahg496689 cellulose synthase 6
16.3095 Ahg475877 beta-ketoacyl reductase 1
21.587 Ahg482933 pseudouridine synthase family protein
21.6795 Ahg481867 Protein of unknown function (DUF3527)
27.7489 Ahg480409 DNA-directed RNA polymerase family protein
28.5307 Ahg952212 ribosomal protein L23AA
28.5307 Ahg920592 conserved peptide upstream open reading frame 55
28.8617 Ahg472070 methylthioalkylmalate synthase-like 4
35.4683 Ahg930098
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression