Detail



ID : Ahg471086

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|471086|fgenesh2_kg.1__1040__AT1G09820.1
Sequence
ATGTTCCCCA AATCCTTCGC CGTAAGTAGA AAAATCTCGA ATTTCATAAA ACAAGCTTCG GGTTTAAGAA GACTCGGTTC TTCTTTAGCT ACCATCACCG GAAGCCCTTG CCCACCCAGA TTTGATGTAG CTGTCATCGC TGATCTCATA GAGAAGCAAC ACTGGTCAAA GCTTGGATTT CATGTGAAAG ACATAAATCC TAACGAGCTG TTTCGACAGT TGATAAGTTC TGAGCTTAAT CCAGATTTGT GCCTCAGGTA CTATACCTGG TTAGTGAAGA ACCGTGACAT CTCTGTTTCG TTAGAGCTCA CATTTAAGCT CTTGCATTCT CTCGCGAATG CGAAAAGGTA CTCTAAGATC CGATCTTTCC TTGATGGGTT TGTGAGGAAT GGATCTGATC ATCAGGTTCA CTCGATTTTC CATGCAATTT CAATGTGTGA CAATGTTTGT GTCAATTCGA TTATAGCTGA TATGTTGGTA TTGGCTTATG CGAATAATTC GAGATTCGAG TTAGGATTTG AGGCGTTTAA GCGTTCAGGT TATTATGGGT ATAAGTTGTC GGCTTTGTCT TGTAAGCCTT TGATGGTTGC GTTGTTGAAG CAGAATCGGT CTGCGGATGT TGAATATGTG TATAAGGAGA TGATTAGGAG GAAGATTCAA CCAAATGTGT TCACTTTCAA TGTTGTGATC AACGCGTTGT GCAAAACTGG GAAAATGATT AAAGCTAGGG ATGTTATGGA GGACATGAAA GTGTATGGGT ATTCTCCAAA TGTAGTTAGT TACAACACTC TGATAGATGG GTACTGCAAG CTTGGGGGAA ATGGGAAAAT GTACAAAGCA GACGCGGTTT TGAAGGAAAT GGTGGAGAAT GAAGTGTCAC CGAACTTGAC AACATTCAAT ATACTGATTG ATGGGTTCTG GAAAGATGAC AACCTTCCGG GTAGTTTGAA GGTGTTTAAA GAGATGCTGG ATCAAGACGT GATACCGAAT GTGATCACTT ATAATTCGTT CATAAATGGT TTGTGCAATG GAGGTAAGAT CAGCGAGGCT ATTGGTATGC GCGATAAGAT GGTCAGTGCA GGTGTGCAGC CTAACTTAAT TACTTACAAC TCTCTTATAA ACGGGTTTTG CAAGAACGGT ATGCTGAAGG AAGCTCTTGA TATGTTTGAC TCAGTAAAAG GCCAAGGAGC TCGTCCCACT ACTAGAATGT ATAACATGCT TATCAATGCG TATTGTAAGT TAGGCAAAAT CGATGATGGC TTTACACTGA AAGAAGAGAT GGAACGAGAA GGGATTGTAC CAGATGTTGG AACTTATAAT TGCTTGATTG CTGGTCTATG TAGAAACGGT AACATAGAAG CAGCTAAGAA GCTTTTTGAT CAATTGACTA ATAAAGGACT TCCTGATCTT GTGACATTTC ACATACTAAT GGAGGGTTAT TGCAGCAAAG GTGAATCGAG AAAAGCGACA ATGCTTTTGA AAGAAATGTC AAAGATGGGT CTGAAACCGA GACATCTGAC ATATAACATT TTGATGAAAG GCTACTGTAA GGAAGGAAAT CTGAAGGCAG CAACGAACAT GAGGACACAG ATGGAGAAAG AAAGACGGTT GCGGATGAAT GTAGCATCAT ATAATGTGCT TCTACAAGGA TATTCTCAAA AGGGAAAGTT GGAAGATGCA AACATGCTTT TGAATGAGAT GTTGGAGAAA GGTGTAGTCC CGAACAGAAT AACCTATGAG ATAGTTAAAG AAGAAATGGT AGATAAAGGT TTCGTCCCAG ACATTGAAGG GCATCTATGT AACGTCTCCA CCAAATCCTA AATTATCAGT GACCATTATG AGAAGCAAAT CTCTTTCTCT CACAGAAAAT TATACTCGAA CCCTGCAGAA TCTTGTTCTA TCGGAGACCA GTGTGACTCA AGCTTCCCAG ATTGTATGGC GTTATACTGG ATTGTGTCTT CTGTTTTCTG CTATGCCTAC AGGTCCCTGG ATTATATAAT GATTCAGCTT CATTTGGTAA CTCAGAGAAA GTTTAGATCT TGTAACTTTA CTGTTCTTGT AATTACATGA CACCA 
Length2075
Protein Sequence
Protein Residue
Map Locationscaffold_1: 3565375.. 3567600
Download Sequence
A.thaliana
AGI-codeAT1G09820.1
DescriptionPentatricopeptide repeat (PPR-like) superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
18.1384 Ahg488256 Flavin containing amine oxidoreductase family
26.8328 Ahg328832 Leucine-rich repeat transmembrane protein kinase family protein
38.7298 Ahg928729 RNA recognition motif and CCHC-type zinc finger domains containing protein
41.3159 Ahg336541 HISTIDINE TRIAD NUCLEOTIDE-BINDING 2
59.397 Ahg487180
59.8164 Ahg476563 purine biosynthesis 4
99.4082 Ahg326224 copper/zinc superoxide dismutase 3
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression