Detail



ID : Ahg326224

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|326224|fgenesh1_pm.C_scaffold_6001444
Sequence
ATGGAAGCTC CTAGAGGCAA TCTGAGAGCG GTGGCTCTTA TCGCCGGCGA TAACCACGTC CGGGGATGTC TTCAATTCGT ACAAGACACT TTCGGGACCA CTCATGTTAC CGGGAAGATC TCAGGACTCT CTCCTGGCTT CCATGGATTT CATATTCACT CTTTTGGTGA TACCACAAAT GGCTGCAACT CTACTGGACC TCACTTCAAT CCATTAAATC GAGTTCACGG GCCACCGAAT GAGGAAGAGC GTCATGCAGG CGATTTGGGT AACATTCTTG CAGGATCAGA TGGTGTTGCT GAAATCTCAA TCAAAGACAA ACAGATACCA CTTAGTGGGC AGTATTCTAT ACTGGGGAGG GCGGTTGTTG TGCATGCTGA TCCTGATGAC CTTGGGAAAG GAGGGCACAA GCTTAGCAAA TCAACGGGAA ACGCAGGCTC GAGAGTTGGA TGCGGTATCA TCGGACTTCA ATCATCTGCA GATGCTAAAC TGTAG 
Length495
Protein Sequence
Protein Residue
Map Locationscaffold_6: 7173984.. 7175516
Download Sequence
A.thaliana
AGI-codeAT5G18100.1
Descriptioncopper/zinc superoxide dismutase 3
TAIR curator summaryA putative peroxisomal CuZnSOD inducible by a high-light pulse.
Alias[CSD3][copper/zinc superoxide dismutase 3]
Gene coexpression
MR
MR Locus Description
4 Ahg495916 chaperone binding;ATPase activators
6.245 Ahg355185 P-loop containing nucleoside triphosphate hydrolases superfamily protein
9.32738 Ahg496008 Quinone reductase family protein
10.198 Ahg936303 CAAX amino terminal protease family protein
10.3923 Ahg926152 Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein
11.1355 Ahg482091 ARM repeat superfamily protein
12.6491 Ahg488867 Peptidase M28 family protein
13.5647 Ahg490794 Protein of unknown function (DUF3550/UPF0682)
15.3623 Ahg485429 Uncharacterised protein family (UPF0497)
15.8745 Ahg492220 phosphatidylserine decarboxylase 3
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression