Detail



ID : Ahg471105

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|471105|fgenesh2_kg.1__1059__AT1G09940.1
Sequence
TCAATGGTGT TGAATTGACC CGTTCTTAAA ACCCGACCCG GATCCACCTG CTTCTTTCAA CTAACACACG CTCCTGATCC TAACCATTTT CAAGTCAAAA AATCATTATC AATAATTCTC CTTCTTCTTC AACATCGCAT AAATTCCCTC TTTGTCTGCT CGATTCCTGA TCTCTAGGGT TTGGGTTCTG GAGACGAAGA GGGTGTTTTG TGTATTTGAG ATTATTGCTT TGTAAAACTC AAAAATCTAT GGCGGTTTCT ACCTCCTTCG TTGTTACACC AAAGCTGGAG AATTTGTTAG CCAATCCAAC GTCTTCTTCT CCGGCGCCGT TGGGTGTAAT TGGGATTCGT GCTCTTCCGA TGAACAACAA TAGGAACAAG CGAGGTCTGA TCCAGAGAGC CCGTTGCGAG ATTTCTCCGT CTAAGGCAGC TAGCATCTCA GCTCTCGAGC AGCTTAAGAC TTCTGCTATT GACCGATACA CTAAGGAAAG AAGCAGCATT ATTGTGATTG GGCTTAGCAT CCACACAGCT CCTGTTGAGA TGCGTGAGAA GCTTGCTATT CCAGAAGCTG AATGGCCACG AGCGATCGCT GAATTGTGTG GTTTGAATCA TATTGAAGAA GCTGCTGTCC TCAGTACCTG CAACCGAATG GAGATTTATG TCTTGGCTCT ATCACAGCAT CGTGGAGTCA AAGAAGTTAC TGAGTGGATG GCTAAGACAA GTGGAATCCC GGTTTCCGAA ATCTGTCAGC ATCGTTTTCT ATTGTACAAC AAGGACGTCA CACAACATAT ATTTGAAGTC TCAGCTGGTC TAGACTCCCT TGTCATAGGA GAAAATCAGA TACTTGCACA GGTTAAACAA GTTGTGAAAG TAGGTCAAGG AGTCAATGGG TTTGGGAGGA ACATTAGTGG GCTATTTAAA CACGCAATCA CAGTTGGGAA GCGTGTCAGA ACAGAGACAA ATATCGCTGC TGGGGCTGTT TCTGTTAGCT CGGCTGCAGT CGAACTTGCT CTCATGAAAC TTCCCGAATC TTCTCATGCA TCATCTGCTA GGATGTTGGT AATTGGTGCT GGAAAGATGG GAAAGCTTGT AATCAAGCAC TTGGTTGCTA AAGGTTGCAC CAAAATGGTG GTTGTGAATC GAAGTGAAGA GAAAGTTGCA GCTATTCGCG AGGAGATGCC ATATGGTGTT GAGATTATTT ATAAACCCCT TGATGAGATG CTATCTTGTG CAGCTGAAGC CGATGTAGTC TTTACTAGCA CAGCTTCTGA GACACCATTA TTCTTGAAGG AGCAAGTAGA GACTCTCCCT CCTGTTAGAG ATACGAGACT CTTTGTTGAT ATCTCTGTTC CTAGAAATGT CGGGTCTTGC GTCGCTGAAA TAGATGGTGC ACGGGTTTTC AACGTGGATG ACCTCAAGGA AGTCGTTACT GCAAATCAAG AAGACAGGGT GAGGAAAGCA ATGGAAGCTC AGGCTATAAT TACAGATGAA TCGAAACACT TTGAAGCATG GAGGGATTCG CTGGAGACGG TTCCAACAAT CAAGAAATTA AGGGGATATA CAGAGAGAAT TATAGCTGCA GAGATTGAGA AATTCTTGCC GAAATCGGGC ATTGAGATGA ACAAGAAGTT GAGAAAATCA GTAGATGATC TAATCCGAGG TATAGTGAAC AAGCTCCTGC ACGGTCCAAT GCAGCATTTG AGATGCGATG GGAGCGATAG CAGAACACTG AGTGAGACAC TGGAGAACAT GCAGGCTCTG AACAGGATGT ATGGACTTGA TGCAGAGATA CTCGAGGAGA AGATTAGAGC AAAGGTGGGA AAAAAGTAGA GAAAAGAGAG CCTTTGTTGC ATCCATTTTT TAGGTTCGTA GAGGTTAAAA ATCGGCACCT TTGTAATATA CAAACTTGAG TAGAGAGTGA AGATAGTTTC TGGTGGAGAA GATCTTCTGG TTCATGCCCT TGATGGGAAG CATACCATAA TTTTTTAACT TTTTATACAT AATATATA 
Length2008
Protein Sequence
Protein Residue
Map Locationscaffold_1: 3618341.. 3620808
Download Sequence
A.thaliana
AGI-codeAT1G09940.1
DescriptionGlutamyl-tRNA reductase family protein
TAIR curator summaryEncodes glutamyl-tRNA reductase. Involved in heme biosynthesis in non-photosynthetic tissues and induced by oxidative stress in photosynthetic tissues to supply heme for defensive hemoproteins
Alias[HEMA2]
Gene coexpression
MR
MR Locus Description
7.2111 Ahg342773 Magnesium transporter CorA-like family protein
10.4881 Ahg472337
13.4164 Ahg488524 Chaperone DnaJ-domain superfamily protein
13.9642 Ahg927234 transferases, transferring glycosyl groups
14.8324 Ahg925447 RNA polymerase subunit alpha
15.4919 Ahg921175 emp24/gp25L/p24 family/GOLD family protein
18.2209 Ahg496632 GTP cyclohydrolase II
18.9737 Ahg921504 Domain of unknown function (DUF23)
19.7484 Ahg936467 plant UBX domain-containing protein 1
20.2731 Ahg944390 high-affinity nickel-transport family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression