Detail



ID : Ahg925447

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|925447|scaffold_201008.1
Sequence
CGATTCAATG ATCTGATCAA ATAAAATTAC TATGGTTCGA GAGAAAGTCA AAGTATCTAC TCGGACACTA CAGTGGAAGT GTGTTGAATC AAAAAGAGAC AGTAAGCGTC TTTATTATGG ACGCTTTATT CTGTCTCCAC TTATGAAAGG TCAAGCCGAC ACAATAGGCA TTGCGATGCG AAGAGCTTTA CTTGGCGAAA TAGAAGGAAC ATGTATTACA CGTGCAAAAT CTGAGAACAT ACCACATGAC TATTCTAACA TAGTAGGTAT TCAAGAATCA GTACATGAAA TTTTAATGAA TTTGAACGAG ATTGTATTAA GAAGTAATCT ATATGGAACG CGCAACGCGC TTATTTGTGT CCAAGGTCCT GGATATATAA CTGCTCGAGA CATAATTTTA CCGCCCTCTG TAGAAATCAT TGATAATACA CAGCATATAG CTACCTTAAC GGAAACAATA GATTTGTGTA TTGAATTAAA AATCGAGAGG AATCGCGGAT ATAGTCTAAA AATGTCAAAT AACTTTGAAG ACAGAAGTTA TCCTATCGAT GCTGTATTCA TGCCTGTTGA AAACGCGAAT CATAGTATTC ATTCTTATGG GAATGGGAAT GAAAAACAAG AGATTCTTTT TCTAGAAATA TGGACAAATG GAAGTTTAAC TCCTAAAGAA GCACTTCATG AAGCCTCCCG GAATTTGATT AATTTATTTA TTCCTTTTCT ACATGTAGAA GAAGAAACGT TCTATTTAGA GAACAATCAG CATCAAGTTA CTTTACCCTT TTTTCCTTTT CATAATAGAT TAGTTAACCT AAGAAAAAAA ACAAAAGAAC TAGCCTTTCA ATATATTTTT ATTGACCAAT TAGAATTGCC TCCCAGAATC TACAATTGTC TCAAAAAGTC CAATATACAT ACATTATTGG ACCTTTTGAA TAACAGTCAA GAAGACCTTA TCAAAATTGA ACATTTTCAC GTAGAAGATG TAAAAAAGAT ATTAGACATT CTAGAAAAAA AATAGAAAAA GCATTTCAAT TTCAAATTG 
Length1039
Protein Sequence
Protein Residue
Map Locationscaffold_2: 8182850.. 8183888
Download Sequence
A.thaliana
AGI-codeATCG00740.1
DescriptionRNA polymerase subunit alpha
TAIR curator summaryRNA polymerase alpha subunit
Alias[RPOA][RNA polymerase subunit alpha]
Gene coexpression
MR
MR Locus Description
3 Ahg922840 thioredoxin Y2
4.24264 Ahg933369 ribosomal protein L2
5.2915 Ahg311338 translocon at the outer envelope membrane of chloroplasts 33
5.56776 Ahg475549 structural constituent of ribosome
7.68115 Ahg932772 haloacid dehalogenase-like hydrolase family protein
8.06226 Ahg472995 P-glycoprotein 13
9.59166 Ahg470572 Uridine diphosphate glycosyltransferase 74E2
9.8995 Ahg919125 Ribosomal L28 family
10.3923 Ahg907857 ribosomal protein L16
10.3923 Ahg915009 ribosomal protein L16
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression