Detail



ID : Ahg471170

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|471170|fgenesh2_kg.1__1124__AT1G10550.1
Sequence
TCAGTAATCA AAAGTATCAA ACACAAAATG AAGATTATGT GGGAAACAGC AGTTGTGTTT TGTCTTTGTT CATTGTCTTT GGTTTCTTCA CACAGCAGGA AATTCACAAC ACCAAACGTG ACACGCCTCA CAGATCAATT CACTAAGATC ACCATTGAAA ATGGCTTCGT CAGACGTTTC GGAGCTCATA ATATTCAGGT CAATGGCTCC CTCGCAAAGC TCACTCTCGA CAAATCCTCT GGAGCTGGGT TGGTGTCAAA GAACAAGTAT CAGTATGGTT TCTTCAGTGC AAGACTCAAG CTTCCTGCTG GATTTGCCTC TGGTGTTGTG GTTGCTTTCT ATTTATCAAA CGCAGAGAGT TATCCAAAAA ACCACGACGA GATAGACATA GAATTGTTGG GTAGAAGTAG GAGAGATGAT TGGACGATCC AAACGAATGT GTATGCAAAT GGAAGTACGA GAACGGGAAG AGAAGAGAAG TTCTATTTTT GGTTTGATCC AACGCAAGCC TTTCACGACT ATACCCTCAT TTGGAACTCC CACCATACTG TATTTTTGGT AGACAACATT CCGGTTAGGC AGTTTCCGAA CCGGGGAGCC TTCACAAGCG CGTATCCGTC TAAACCGATG TCTCTATACG TCACCGTTTG GGACGGTTCA GAGTGGGCCA CTAAAGGTGG TAAGTACCCC GTCAACTACA AGTACGCCCC TTTCGTGGCC TCCGTTGCTG ACGTGGAGTT AAGTGGCTGC TCCGTTAACA ACGGCTCCTC TACCAGGTCC GGGCCATGTA CCAAGTCGGG CGGGTCGATT TCGAGTCTGG ACCCTGTTGA TGGTCAGGAT TTTGCCACGT TGTCGAAAAA TCAGATCAAT GCCATGGATT GGGCTCGGAG AAAGCTAATG TTCTATTCTT ATTGTAGTGA TAAGTCGAGA TACAAAGTCA TGCCTGCTGA GTGCAACTGA TTTTTAATTT AGTTAAAACA CACAACATTG TTACTTTATA ATTTTACTTA GGATACTAGC GGTTTAAAGT A 
Length1031
Protein Sequence
Protein Residue
Map Locationscaffold_1: 3936376.. 3938389
Download Sequence
A.thaliana
AGI-codeAT1G10550.1
Descriptionxyloglucan:xyloglucosyl transferase 33
TAIR curator summaryEncodes a membrane-localized protein that is predicted to function during cell wall modification.Overexpression of XTH33 results in abnormal cell morphology. It's expression is under epigenetic control by ATX1.
Alias[XET][XTH33][XYLOGLUCAN:XYLOGLUCOSYL TRANSFERASE 33][xyloglucan:xyloglucosyl transferase 33]
Gene coexpression
MR
MR Locus Description
2.44949 Ahg473657 Phosphate-responsive 1 family protein
3.87298 Ahg497051 Leucine-rich repeat (LRR) family protein
4.47214 Ahg479485 Protein of unknown function (DUF1005)
4.89898 Ahg907677 EXORDIUM like 5
5.47723 Ahg489716 Phosphate-responsive 1 family protein
8.48528 Ahg480606 EXORDIUM like 5
8.77496 Ahg493497 xyloglucan endotransglucosylase/hydrolase 15
8.94427 Ahg472427 Integrase-type DNA-binding superfamily protein
10.247 Ahg914113 Protein of unknown function (DUF1005)
12.7671 Ahg481695 Protein of unknown function (DUF1635)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression