Detail



ID : Ahg497051

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|497051|fgenesh2_kg.9__16__AT4G13340.1
Sequence
ATGAAGAAGA CGATCCAAAT CCTCTTCTTC TTCTTCCTCT TCATCAATCT CACCAACTCT TTCTCTCACG GCGGTGTTCT CTCCGATAAC GAAGTCCGTC ACATTCAACG CCGTCAATTA CTCGAATTCG CCGAACGAAG CGTCAAAATC ACCGTTGATC CTTCTCTAAT CTTCGAGAAT CCGAGATTAC GAAATGCTTA TATAGCTCTA CAAGCTTGGA AACAAGCGAT TCTCTCTGAT CCAAACAATT TCACTTCGAA TTGGATCGGA TCCAATGTCT GTAACTACAC CGGAGTTTTC TGTTCTCCGG CCCTTGATAA TCGGAAGATC CGTACCGTCG CCGGAATCGA TCTCAACCAC GCCGATATCG CTGGTTATTT ACCTGAAGAG CTTGGTTTGT TATCAGATCT CGCTTTGTTT CATGTTAATT CAAACCGGTT TTGTGGTACT GTACCACACC GGTTTAACCG GCTAAAGCTT TTATTCGAGC TTGATCTTAG TAACAACCGG TTCGCTGGGA AATTTCCGAC GGTTGTCTTG CAATTACCAT CGTTGAAGTT TTTAGATCTC CGGTTTAATG AATTTGAAGG AACTGTACCG AAAGAGCTTT TTAGTAAAGA TCTTGACGCG ATTTTTATAA ACCATAACCG GTTCCGGTTT GAGTTACCGG AGAATTTTGG TGATTCGCCG GTTTCGGTTA TTGTTTTGGC GAATAACCGG TTCCATGGTT GTGTACCTTC GAGTTTGGTG GAGATGAAGA ATCTTAACGA GATCATCTTC ATGAACAATG GTCTTAATTC TTGTTTACCG TCTGATATCG GACGGTTAAA GAACGTGACG GTGTTTGACG TCAGTTTTAA CGAACTTGTT GGGCCGTTAC CGGAGAGTGT TGGTGAGATG GTTTCGGTGG AGCAGCTTAA TGTGGCGCAT AATAAGTTGT CGGGGAAGAT TCCGGCGAGT ATTTGTCAGT TACCGAAGCT TGAGAACTTC ACTTATAGTT ACAATTTCTT TACTGGAGAA GCGCCTGTGT GTTTGAGGTT GCCGGAGTTT GATGATCGGA GAAATTGTTT GCCGGGAAGA CCTGCTCAGA GATCGCCTGG TCAATGTAAA GCTTTTTTGT CTCGTCCGCC GGTGAATTGT GGATCGTTTA GTTGCGGTCG TTCTGTTTTG CCTCGTCCCT CCGGTGGTTT TTACTCTCCA CCACCCACTC CGGTCTATTC CCCTCCTCCC CCACCTCCTT GTATAGAACC ACCACCACCA CCACCTCCAC CGTGTATAGA TTATTCACCT CCTCCTCCAC CAGTCATTCA TTATAGCTCT CCGCCTCCAC CGCCAGTCTA CTACAGCTCT CCGCCACCTC CACCAGTCTA TTACAGCTCT CCACCTCCTC CACCGCCGGT TCACTACAGC TCACCGCCAC CACCGCCAGT CCATTACAGT TCTCCGCCGC CACCGCCAGT CCATTACAGC TCTCCGCCGC CGCCGCCATC AGCTCCATGT GAAGAATCTC CTCCACCAGC ACCGGTGGTT CACCACAGCC CACCACCACC GGTGGTTCAC CACAGCCCAC CACCACCGCC AGTAGTCCAC CAAAGCCCAC CACCGCCGTC TCCTGAATAT GAAGGACCAC TTCCACCGGT CATCGGAGTA TCATACGCCT CTCCTCCACC ACCGCCGTTC TATTGATTCT TTTGAGAAAC ACGAGACTGA AACGATGACA GATTGAAATA CTATACGACG TCGTTGGTCA ATTCTTACAC AGAGAAAGAA AAAAAAATTA TAAGAGAAAA AGAAATGGCT GATTAAAAAG TT 
Length1812
Protein Sequence
Protein Residue
Map Locationscaffold_9: 354913.. 356941
Download Sequence
A.thaliana
AGI-codeAT4G13340.1
DescriptionLeucine-rich repeat (LRR) family protein
TAIR curator summary
Alias[LRX3][leucine-rich repeat/extensin 3]
Gene coexpression
MR
MR Locus Description
1.41421 Ahg905564 Leucine-rich repeat (LRR) family protein
2.82843 Ahg495518 protein kinase family protein
3 Ahg484584 Tetratricopeptide repeat (TPR)-like superfamily protein
3.87298 Ahg471170 xyloglucan:xyloglucosyl transferase 33
5.74456 Ahg472678 Nucleotide-diphospho-sugar transferases superfamily protein
8.3666 Ahg472553 ARM repeat superfamily protein
10.4881 Ahg919773 Protein of unknown function (DUF1005)
10.5357 Ahg353717 Calmodulin-binding protein
11.225 Ahg483236 autoinhibited Ca(2+)-ATPase, isoform 4
11.8322 Ahg473657 Phosphate-responsive 1 family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression