| Annotation |
|---|
| Description | jgi|Araly1|471231|fgenesh2_kg.1__1185__AT1G10930.1 |
| Sequence |
TTCTACGGCC TTGAGCTCAA GTCGGTGGTG ACCATTTTAT CCTATATTTC GTCTCTTCGA CTTCCCGGAT TGTTTCGTCG CCGGAGTGTC AAAATCGACG TTACAGAAGC AAGGACTCCA CTGAATCGAA AATTGACTGA TCGATTGCGG TGTCAAGGGG AGTGAAAATT ACTGGAACTT CTTCAGCATG TTAAACCTCT GATTAATTCG AGTCAAATGA GTTGGAGTCA TCTTCCTGAA GTTCAGAAAC CTAGAGGTCC TCAAACAAAT TGGTCAGAAC ATGCAGAGGC ACTCGAGAGT TCATCGTCCG TGACTAAGTT TCTGAGCTCC AATGTCCTTT ACGCTCTAGA AAGTCAAAAG CCTAGAGATA TGTCTGCAAG GTCAATTGCG TTTCCCAGTG TGAATGTGCA TACTTTGGCG CACCCACAAA TTTCAAAGGC TTGGCGTGCT CTTTCAAGTC TCTCAATAAA TAATGCCTAC CTAAGACCTG GCGTTACTCC CCCCATTGAT GATGGTGGCA CCAATGGCTC ATATTCTGCA AGAGAGGGAT CCACCGTGAA AGTTATATCT AGCACTGGTG GTTCTGTTTA TTCGAGCAGC CGACAAAACC AAAATGCAAT GAATGTTTCG GGAACTGGAA GATCCTTTCA CAGTTTCCCT TCCTCTGTAC TTGGTGCTGA TAAAATGATT GCTGAAAAGT TTCCACTGGG AAACGACGAG GTCAGAGAAT CAGAACCCAG TTTCACTCAT TTAAATGGTG TGGAGAAGTC ATTCACGAAT TCTGCATTCC CACCTGAGCA GTTCGAATCT GGAAAAGCAT GTCTTGGTGA TATGGATGAT GATGACATAC TTAAGAATAT TGATGTCGAC CAAATTGTGA TGGAACACTA CCATTCGACA AGTACTCCTC AGCCATCAGT ATCTAATTTT TCATTGAGAA CTCCACCTGC CCCACCTGTG GATAGAAGTG CTTCCAGATT AGAAGAAGAG TGCTGTCTGC CTCCTGAATT ATGTTCCAAC TGTAGTCATG GAATAAAGTT AGGGCTTTGT CCAGAAGCTT CAACCCATGT GGAACAGATG AAGGACGTGT TGCTTGCAAT ATCAAATGAA CTCCTTGACG ATGCTACTGA CCTGAGTCCT TATCGTGTTG AACAGCTTCG TCAAGAGAGA TTACAGCTGA AGAAACAAAT TCAGCAGCTC GAGAACCATA TCCGAGATAA AGAAAGGCAA AAATCTCAGT TTTCGTCATC TACAGCTACT CGTACTTTCC AGTATGAAAC ACCTAAATCA ACAAATTATA AAATGGATCA ACCACAAACT GATTTTCGAG CACATCTAAG TGACCAAGGC AGATATGCCG GTGATAGCTG GAACACGCCA AGAGATTCTT CCTTTTCTGT TGATAGATAT GGTCTTTCAT CTGCTCCTGT AGAGAGGGAA CCATATGTTC CAAAGATTAT TGACGTGACC TACACTGAAG GTTCAAACGA CAAAAAGTGG AGCAGTCGTG AATTTCCCTG GACAAGAAAA CTGGAGGTTA ATAACAAAAA AGTGTTTGGA AATCATTCGT TTCGACCTAA CCAGAGAGAA ATTATCAATG CAACAATGAG TGGCTCTGAT GTTTTTGTTT TGATGCCAAC TGGAGGAGGG AAGAGTTTGA CATATCAGCT CCCCGCTCTG ATCTGTGGAG GAATAACATT AGTCATTTCT CCACTTGTGT CGCTTATTCA AGACCAGATA ATGAACCTAT TGCAGGCCAA TATACCGGCT GCTTCCCTAA GTGCCGGTAT GGAATGGGCT GAACAACTGA AGATCTTTCA GGAGCTGAAT TCCGAGCATT CTAAGTACAA GTTGCTATAT GTCACACCTG AAAAAGTGGC AAAAAGCGAT TCTCTTTTGA GGCATCTGGA AAACTTAAAT TCTCGTGGTT TGCTTGCTCG GTTTGTTATT GATGAAGCTC ATTGTGTGAG CCAATGGGGG CATGACTTTC GACCAGACTA CCAGAGTCTT GGTATTCTGA AGCAGAAATT TCCCAACATT CCTGTGTTAG CTTTAACAGC TACAGCAACA GCCAGTGTGA AAGAAGATGT GGTACAAGCC CTTGGCCTTG TTAACTGTGT CGTGTTCCGG CAAAGTTTTA ATCGTCCAAA TCTATGGTAT TCCGTTGTTC CCAAGACAAA AAAGTGTCTG GAAGACATCG ACAAATTTAT TAAGGAAAAC CATTTTGATG AATGTGGAAT TATATATTGT CTTTCAAGAA TGGACTGCGA AAAAGTCTCT GAACGGTTGC AGGAGTTTGG TCATAAAACA GCATTCTACC ATGGCAGTAT GGAGCCTGAG AAACGTGCCT TTATACAGAC ACAATGGAGC AAGGACGAAA TCAATATAAT ATGTGCTACT GTGGCATTTG GAATGGGAAT CAACAAGCCT GATGTCCGCT TTGTTATTCA TCACTCGCTC CCGAAGTCTA TAGAAGGCTA TCATCAGGAA TGTGGTCGTG CTGGCAGGGA TGGCCAGCGG TCATCTTGTG TTTTGTATTA CGGTTATGGC GACTATATAC GAGTTAAGCA TATGATTAGC CAAGGAGGAG TTGACCAAAG CCCCATGGCA ACTGGGTATA ATCGTGTAGC AAGTTCAGGG AGGATACTTG AAACAAATAC CGAAAACCTT CTCCGCATGG TTAGCTACTG CGAAAATGAG GTGGAATGCC GACGCTTCCT ACAACTAGTG CATTTCGGGG AAAAATTCGA TTCCACAAAC TGCAAAAAAA CGTGTGATAA TTGTTGCAGT AGTCAGAGTT TGATTGACAA AGATGTCACC TTGATCACAA GGCAACTGGT TGAACTGGTG AAGCAAACAG GAGAAAGGTT TTCTTCTGCT CATATTCTTG AAGTCTACAG AGGTTCCTTA AACCAAATGG TCAAGAAACA CAGACATGAG ACTTTGCAGC TCCATGGAGT TGGAAAACAT TTATCGAAAA TTGAAGTCTC TCGTATCTTA CACTATCTCG TAACAGAGGA CATTCTTGTG GAAGATGTTA GGAAAAGTGA TATGTATGGA TCTGTGTCAT CGTTGCTCAA GGTGAATAAC GCAAAGGCTA CCTTACTATT TTCTGGAAGC CAGACTATAA TGATGAAATT CCCTTCTTCT GTAAAAGTAT TAAAGCCAAG TAAACAGGGA GCAACCGCAG CAAAAGGTCC TCTAACATCA GAGAAGCAAA GTACTCTTCC ACTTACAACA GAAGATGCTC CTCCAAAAGA TTTGAATCTC TCTGCCAACA TGTACACAGC CTTGAGGAAA CTTCGTACAG CTCTTGTCAA AGAAGCCCCT GATGGTGTCA TGGCATATCA TATATTTATC AATTCAACGC TTCAGCAGAT AAGCAGACGA ATTCCCAGAA CCAAAGAGGA ACTCCTTGAA ATCAATGGCC TTGGGAAGGC CAAAGTAAGC AAGTACGGTG ATCGGTTGTT GGAAACAATA GAAACAACGG TGAACGAGTA CTACGGAACT AATAAGAAAG ACTCCATCAT CAGCAACGAC AGTCCCGATT CAGGGAAGAG GAGAAGAGAC GAGAACATTA GTCCAAATGT AGCCGAGGAT GATGATTTCG AAGTAAGCCC AAGCCAGTCC TGCAAAAAGA CAGTGAGAAA CAAAAGCAAT GAGGTTCTTC ATGGTGAATG TGTAGATGGA GATAGAAGAG GCATGGTTAT GGAGAAGCTT GACTTTGATT TCAGAGACGA AGATGTGTCA GAGATACGAC CGGAGGGAAG AGTATTACCT TGGTGAAGTT GTGACCACTG AAATTATAGT TGTAAAGAAA TTTTGCTGTA ATATTTTGTT AACTTCTGTG GCCTACTCAA TGTACCTTGA TGTTCAGTAG ATTGCAGAAA CTATTTATTA GATGCTGACT TCATTGATGA TCT |
| Length | 3923 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_1: 4151488.. 4159298 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G10930.1 |
| Description | DNA helicase (RECQl4A) |
| TAIR curator summary | DNA helicase involved in the maintenance of genome stability by modulation of the DNA damage response and suppression of homologous recombination. |
| Alias | [ATRECQ4A][ATSGS1][RECQ4A] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 8.12404 |
Ahg485869 | RNI-like superfamily protein |
| 16.0624 |
Ahg951586 | Maf-like protein |
| 16.6132 |
Ahg472799 | Phosphoribulokinase / Uridine kinase family |
| 21.4009 |
Ahg478403 | DNA GYRASE A |
| 21.6333 |
Ahg318028 | |
| 24.0416 |
Ahg475695 | Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain |
| 32.4962 |
Ahg493259 | RNA polymerases M/15 Kd subunit |
| 41.7373 |
Ahg936621 | methyltransferases |
| 44.4522 |
Ahg481044 | ribonucleotide reductase 1 |
| 45.5961 |
Ahg493196 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|