Detail



ID : Ahg493259

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|493259|fgenesh2_kg.7__2692__AT4G16265.1
Sequence
CTCTCTCATG TCCGAGTGAA CAAATCCCGC CAAAGATACT GAGAGACTGA TTGTGAAATC AAAGAAGTAC TCAAAAGCTC GTTATATAAA GAAAGATTCT GCGAAGATGA GTACTATGAA ATTTTGTCGT GAATGTAATA ACATTCTATA TCCTAAGGAA GACAAGGAGC AATCAATCCT CCTCTATGCG TGTCGTAATT GTGATCACCA GGAAGCAGCG GATAACAACT GTGTTTACAG AAACGAGGTT CATCACTCTG TAAGTGAACA AACTCAAATC CTATCCGACG TTGCTTCTGA CCCAACTCTT CCACGTACCA AGGCAGTGCG GTGTGCCAAG TGTCAACACG GCGAAGCTGT CTTCTTCCAG GCCACTGCTA GAGGCGAAGA AGGAATGACT CTGTTTTTCG TTTGCTGCAA CCCGAACTGT AGTCACCGTT GGAGAGAATA GAATGATAGA AGACTACATT TTTCAAATGT AACGTGTATC TGAGTTCCTC TTTATGAGTT TCATACAATT CAATTTGGAG TTTTCTGTGT AAAAATATGA ATACTACGGG AGTGTTTTTC AGGGTCTTTA ATGATCATTT TGGTTTTT 
Length598
Protein Sequence
Protein Residue
Map Locationscaffold_7: 11409710.. 11411474
Download Sequence
A.thaliana
AGI-codeAT4G16265.1
DescriptionRNA polymerases M/15 Kd subunit
TAIR curator summaryOne of two highly similar, non-catalytic subunits common to nuclear DNA-directed RNA polymerases II, IV and V; homologous to budding yeast RPB9. Appears to be redundant with At3g16980
Alias[NRPB9B][NRPD9B][NRPE9B]
Gene coexpression
MR
MR Locus Description
9.48683 Ahg491403
11 Ahg902559 glycoprotease 1
11.7473 Ahg927661 polypyrimidine tract-binding protein 1
13.4907 Ahg482844 MATE efflux family protein
14.3527 Ahg949887 Ribosomal protein L9/RNase H1
16.4924 Ahg342721
21.4009 Ahg936345 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain
25.219 Ahg915201 HhH-GPD base excision DNA repair family protein
27.7669 Ahg475311 DEA(D/H)-box RNA helicase family protein
31.1127 Ahg904129 Nascent polypeptide-associated complex (NAC), alpha subunit family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression