Detail



ID : Ahg471253

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|471253|fgenesh2_kg.1__1207__AT1G11180.1
Sequence
GTTGTGAAAT CGAGAGATAA GCTTTGGTTA ACCATGGCTG GTCGTTACGA TCGTAACCCA TTCGACGAAC AAGATGAAGT CAATCCTTTT GCTAACCCTG GGAGTGTTCC CGCTGCTTCG AATTCCAGAT TATCGCCTTT GCCTCCCGAA CCTGCTGGTT TTGGTTATGG TGACATTCCT CTTGACAGAC CTGGGTCTGG TACACAGGAT TTGAAAAAAA AGGAGAAGGA GCTTCAAGCC AAAGAAGCTG AGCTAAGACG AAGAGAGCAG GATCTCAAAC GGAAAGAGGA TGCTGCTGCA CGAGCCGGAA TTGTTATCGA GGCGAAAAAC TGGCCACCCT TCTTCCCACT TATCCACCAT GACATTGCAA ATGAAATTCC TGTTCGGCTC CAAAGGCTAC AGTATATTGC ATTTGCAACA TATTTGGGGT TGGTTCTTGC ACTTTTCTGG AATATCATCG CTGTTACTAC TGCTTGGATC AAAGGAGAAG GAGTAACAAT TTGGCTTCTC GCCATTATTT ACTTCATATC GGGTGTCCCA GGAGGCTATG TGTTATGGTA TCGGCCTCTC TACCGTGCCT TCAGAAGTGA TAGTGCATTC AACTTTGGAT GGTTTTTCTT GTTCTACATG CTCCACATAC TTTTCTGCGT CTTTGCTGCA GTTGCTCCAC CTATTGTCTT CAAAGGAAAA TCACTTGCGG GCATATTACC TGCAATAGAT GTGTTGAGCG CTCAGGCATT GGTCGGGATC TTCTACTTCA TCGGGTTTGG GTTATTCTGC CTTGAATCAG TGGTCAGCAT CTGGGTTATT CAGCAAGTAT ACATGTACTT CCGAGGAAGC GGGAAAGCGG ATGAGATGAG ACAGGATGCT GCAAGAGGAG CCATGAGAGC TGCCATATGA GAAAAATGTG AATCAATGAT TGTAGTCATC TCTTCTGAAG C 
Length941
Protein Sequence
Protein Residue
Map Locationscaffold_1: 4263872.. 4266528
Download Sequence
A.thaliana
AGI-codeAT1G11180.2
DescriptionSecretory carrier membrane protein (SCAMP) family protein
TAIR curator summary
Alias[AtSCAMP2][SCAMP2][Secretory carrier membrane protein 2]
Gene coexpression
MR
MR Locus Description
18.303 Ahg946563 glycosyltransferase family protein 28
25.0998 Ahg475014 Aldolase-type TIM barrel family protein
27.2397 Ahg343397 basic region/leucine zipper motif 27
30.1662 Ahg913410 SPla/RYanodine receptor (SPRY) domain-containing protein
35.3553 Ahg490202 3-oxo-5-alpha-steroid 4-dehydrogenase family protein
35.3836 Ahg321431 Thioredoxin superfamily protein
43.7493 Ahg899789
56.5066 Ahg922228
56.7098 Ahg943308 glycosyltransferase family protein 28
60.0999 Ahg474732
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression