Detail



ID : Ahg913410

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|913410|Al_scaffold_0001_3664
Sequence
ATGAACTCTT CACCGCCGCC GGCGAATTCC GCCAACGGCG ATACAACCAA CAACGTCGTG AACGGTCAAG ATCTGAACTT AAACTTCTTG GACAAGATTC GTCTCTCCGC GACACGAGAT GCGAAGGAAG ACGAAGGAGA AGATTTACCG ACGGAGCTTA ACACGATCAA TAGCGCCGGC GGGTTTCTTG TGGTTTCTCC GGATAAGCTT TCCGTGAAGT ACACTAATAC GAATCTACAT GGTCACGATG TTGGTGTTGT TCAAGCTAAT AAACCTGCTC CGATCAAGTG TCTTACTTAC TACTTTGAGA TTTTTGTTAA AGATTCTGGG ATTAAAGGTC AAATTGCTAT TGGTTTTACT AAGGAAAGCT TCAAAATGCG GAGACAACCT GGATGGGAAG TGAACAGCTG TGGCTATCAT GGGGATGATG GATTCCTATA TCGTGGACAG GGGAAAGGTG AACCTTTTGG TCCGAAGTAT ACAAAAGATG ATACAGTTGG CGGTGGTATA AACTATGCTT CGCAAGAGTT CTTTTTCACT AAAAACGGAG CTATTGTTGG GAAAATCCCT AAGGACATAA GAGGTCATCT ATTCCCTACT GTAGCTGTAC ATAGCCAAAA TGAGGAGGTA TCAGTCAATT TTGGGAAGAA GAAATTTGCT TTCGATATTA AGGTATGCCT CATGTCCGTT CTTGGTACCG GGGTTACGGA ATCTATGGCA ATGGGATATG AAGCAACAGA GAGGAATAAG CAACAAATAA CTATCGAAAA ACTATCCACA CCTCCAAACA TTGGTTATGG GCTTGTAAAG ACCTACCTGC TACACTATGG GTATGAGGAG ACACTCAATG CTTTCAACCT TGCTACTCAA ACTACAGTTC CTCCAATCCA TATAGATCAA GAAAATGCTA TTGATGAGGA TGATTCCTCA TATGCCTTGA AACAGAGAAA GAATTTTAGA CAGCTTGTTA GGAATGGTGA GATTGATACT GCTCTGGCGG AACTCCGAAA TTTGTATCCC CAAATTGTAC AGGATGATAA ATCTGTAGTT TGCTTCCTCC TTCAATGTCA AAAGTTTATT GAATTAGTAC GGGTTGGAAA ACTTGAAGAA GGTGTGAAGT ATGGCAGACT CGAGTTAGCT AAATTTGTTG GGTTAACTGG ATTTCAAGAT ATAGTCGAGG ACTGCTTTGC TTTACTCGTG TATGAAAAGC CTGAGGAATC ATCGGTTGGG TATTTCCTAG AAGACTCGCA GAGGGAACTA GTGGCTGATG CGGTGAATGC AGCAATACTA TCAACAAATC CAAATAAGAA AGATGTGCAG AGAAGCTGTC ACTTGCAATC CCATCTAGAG AAACTGCTAA GACAGTTAAC CGTGTGCTGT TTGGAAAGGC GGTCACTGAG TGGAGACCAA GGTGAAACAT TCCGGCTTCA CCATGTTCTT AACAACAACA GATAA 
Length1455
Protein Sequence
Protein Residue
Map Locationscaffold_1: 16440184.. 16443271
Download Sequence
A.thaliana
AGI-codeAT1G35470.2
DescriptionSPla/RYanodine receptor (SPRY) domain-containing protein
TAIR curator summary
Alias[RanBPM][Ran-binding protein in the microtubule-organizing centre]
Gene coexpression
MR
MR Locus Description
21.7715 Ahg471034 glucose-6-phosphate dehydrogenase 4
23.622 Ahg488264 bromodomain and extraterminal domain protein 9
30.1662 Ahg471253 Secretory carrier membrane protein (SCAMP) family protein
36 Ahg473775 VIRE2-interacting protein 1
38.1051 Ahg920054 Flavin-binding monooxygenase family protein
38.9615 Ahg490939 Thioredoxin superfamily protein
45 Ahg945657 transcription initiation factor IIA gamma chain / TFIIA-gamma (TFIIA-S)
53.376 Ahg483562
56.285 Ahg945681 NAD(P)-binding Rossmann-fold superfamily protein
56.7715 Ahg477504 Plant stearoyl-acyl-carrier-protein desaturase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression