Detail



ID : Ahg471404

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|471404|fgenesh2_kg.1__1358__AT1G12550.1
Sequence
CAATGACGGA ATCTTCAGAT CCTCCGCTTG TTCTCCTTCA CCGACCACCG TCTCTAACTT TCATGGACGA GACTATAAGT CGTGAATTCC GGACTCTCAT CACCGACACT TCATCGGAAT CACTCCCGAG TTTCCTCTCC CGTCACGCCT CCTCAGCCAG AGCCTTCGTA GTCATCGGTA GACTTCCGGT AACCGAAGAA CTCCTTTCTC ATCTCCCTTC TCTCCAGATA CTCGTCTGCA CTAGCGTCGG CATCGATCAC ATCGATCTCG CCGCATGCAA GCGTCGCGAT CTCGTTATCA CGAACGCTGG CAACGCGTTT TCCGATGACG TTGCGGATTG TGCCGTCGGT TTGCTTTTAA ATGTCCTCCG TCGTATTCCT GCCGCCGATC GTTACGTCCG GTCTGGTAAT TGGGCGAAAT TTGGGGATTT TCAATTAGGG TCCAAGGTTT GTTCGAAGAA AGTCTTTGTG GTTGTTACAG GTAAGATTGG ATCCTTTGTT GCCAAAAGAC TTGAATCCTT TGGTTGTATC ATCTCTTACA ACTCAAGAAG TCAGAAACAG AGCAGTCCAT ACCGGTATTA CCCCGATATT CTCTCTTTAG CAGCTGACAA CGATGTCCTC GTCCTCTGCT GCTCTTTGAC AGACGAAACG CACCACATTG TGAATAGAGA AGTGATGGAG TCGCTTGGTG AGGATGGGGT TATAGTCAAT GTGGGACGAG GAGGTTTGAT TGATGAGAAG GAGATGGTGA AGTGTTTGGT TGAAGGTGTG ATTGGTGGTG CCGGTTTAGA TGTGTTTGAG AACGAACCGG CAGTTCCTGA GGAGTTGTTT GGTTTGGACA ATGTTGTGTT GTCTCCACAT TTAGCTGTGG CTACCCCAGG GTCTTTGGAC AATGTTGCAG AGATCGCTTT AGCTAACTTG AAGGCGTTTT TCTCGAACCG GCCTTTGCTT TCTCCGGTTC AATTGGATTG AGAGAGCGTA CGGTTTGATC ATAATCAATA ATCTAAAAAG AAAGTGTATT GAATATTTGA ATGTAC 
Length1036
Protein Sequence
Protein Residue
Map Locationscaffold_1: 4852170.. 4853464
Download Sequence
A.thaliana
AGI-codeAT1G12550.1
DescriptionD-isomer specific 2-hydroxyacid dehydrogenase family protein
TAIR curator summary
Alias[HPR3][hydroxypyruvate reductase 3]
Gene coexpression
MR
MR Locus Description
15.4919 Ahg343889 Leucine-rich repeat protein kinase family protein
18.1659 Ahg472135 Small nuclear ribonucleoprotein family protein
22.1811 Ahg489984 serine racemase
27.9464 Ahg937729 6-phosphogluconolactonase 2
30.1828 Ahg924903 Protein of unknown function (DUF761)
35.1426 Ahg928343 2-oxoacid dehydrogenases acyltransferase family protein
38.9615 Ahg472449 Protein of unknown function (DUF581)
42.5088 Ahg946382 Drug/metabolite transporter superfamily protein
44.7996 Ahg479752 PLAT/LH2 domain-containing lipoxygenase family protein
45.1996 Ahg496871 FAD-dependent oxidoreductase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression