Detail



ID : Ahg472135

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|472135|fgenesh2_kg.1__2089__AT1G19120.1
Sequence
AAATTAGGGT TCTTTGATTC TCTGTTCTTG AGCTCAGTTA TCGAGGAGAA GAAAAGGAGA GAGATCGGGA ATTGGGAAAC TGACAAGTCA AAAAGGCAAA TGCGAGTGGA GGAGATTGAG TTTTAGTTAG AGTTCCAATG TCTTGGGCTG CTCCTGATGA TATCTTCTTC TCCACTTCTC TTGCTGCTTA CTTAGACAAG AAACTTCTTG TGTTGCTTCG TGATGGTAGG AAACTGATGG GTTTACTTCG ATCCTTTGAT CAATTTGCTA ATGCTGTTAT AGAAGAAGCT TATGAAAGAG TCATCGTGGG TGATCTCTAC TGTGATATTC CTTTAGGTCT ATACATTATC CGTGGAGAAA ATGTTGTCTT GATTGGTGAA TTGGACGTTG AAAAAGAAGA GCTTCCTGCT CAAATGGTTC AGGTTTCAGA AGCAGAGATA AAAAGGGCTC AGAAAGCAGA GAAAGAAGAA ATGCTTTTGA AGGGTACAAT GCGAAAAAGA ATGGAGTTCC TTGATCTCGA TTAGGATATT TGCTTATGTG CTGCAGCATC GTAGAAACTA GAAGACCTGA AGATGGAGAA TACAGAAGAT CCTTAAATGT CATAATGTTG CTTGATGTGT GTATGTGTGG ATGACATTGA TGAATCCTTG GAACTTAGTG GTTGCAGATC CTCTGCTCTG TTTATGGAAT GAAATTGTTG AGCATGTTCT TTACTG 
Length716
Protein Sequence
Protein Residue
Map Locationscaffold_1: 7698648.. 7699840
Download Sequence
A.thaliana
AGI-codeAT1G19120.1
DescriptionSmall nuclear ribonucleoprotein family protein
TAIR curator summary
Alias[LSM1A][SM-like 1A]
Gene coexpression
MR
MR Locus Description
4.58258 Ahg947046 Ypt/Rab-GAP domain of gyp1p superfamily protein
8.3666 Ahg332076 D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein
9.79796 Ahg485445 Phosphatidic acid phosphatase (PAP2) family protein
13.9642 Ahg944149 Remorin family protein
17.4069 Ahg472790 Phosphatidylinositol 3- and 4-kinase family protein
18.1659 Ahg471404 D-isomer specific 2-hydroxyacid dehydrogenase family protein
27.9285 Ahg496458 P-loop containing nucleoside triphosphate hydrolases superfamily protein
28.9828 Ahg482441 maternal effect embryo arrest 22
30 Ahg323761 gamma response gene 1
32.5883 Ahg334161 ABI3-interacting protein 3
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression