| Annotation |
|---|
| Description | jgi|Araly1|471409|fgenesh2_kg.1__1363__AT1G12610.1 |
| Sequence |
TCAACTCCCA GCAAAAACCA AAACAGAGCA GAAGTCAGAA AAACGACTCT TCATTCGAAC AAATCTTTAT TAACCGGAGT TCTTTTTTGG TTTTCATTTT CCGGCGATTT TTTGCACTTC TGAGTTATGA ACAATGATGA GCTTATTTTG GCGGAGATGA GACCAAAGAA GCGTGCGGGA AGGAGAGTGT TTAAGGAGAC ACGTCACCCA GTTTACAGAG GAATAAGGCG GAGGAACGGC GACAAATGGG TCTGCGAAGT CAGAGAGCCG ACGCACCAAC GCCGCATTTG GCTCGGGACT TATCCCACCG CGGATATGGC GGCGCGTGCT CACGACGTGG CGGTTTTAGC TCTGCGCGGG AGATCTGCGT GTTTGAATTT CGCAGACTCC GCTTGGCGGC TCCCGGTGCC GGAATCCAAT GATCCGGATG TGATAAGAAG AGTTGCGGCG GAAGCAGCGG AGATGTTTAG GCCGGTAGAT TTAGGAAGTG GAATTACGGT TTTGCCCTCT TTGGGAGATG ATGTGGATTT GGGTTTTGGT TCGGGTTCTG GCTCTGGTTC GGGATCAGAG GAGAGGAATT CTTCTTCGTA TGCATTTGGA GACTACGAAG AAGTGTCCAC GACGATGATG AGACTCGCGG AGGAGCCATT AATGTCGCCT CCGCGATCGT ATACGGAAGA CATGACTCCT AGTAATGTTT ACACGGAAGA AGAGATGTGT TATGAAGATA TATCACTGTG GAGTTACAGT TATTAAGTGG GACTCACTCA CATATCTACT ATATATATTA TATAGTTTTT AGTTAGAAGG TTCCTTGATG GTATAATTTT GGAATCTTTG TACCTATAAA TTTATAAACT TATTGGGCTT TATGAATGTT AATATACAA |
| Length | 889 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_1: 4870514.. 4871574 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G12610.1 |
| Description | Integrase-type DNA-binding superfamily protein |
| TAIR curator summary | Encodes a member of the DREB subfamily A-1 of ERF/AP2 transcription factor family (DDF1). The protein contains one AP2 domain. There are six members in this subfamily, including CBF1, CBF2, and CBF3. Overexpression of this gene results in delayed flowering and dwarfism, reduction of gibberellic acid biosynthesis, and increased tolerance to high levels of salt. This gene is expressed in all tissues examined, but most abundantly expressed in upper stems. Overexpression of this gene is also correlated with increased expression of GA biosynthetic genes and RD29A (a cold and drought responsive gene). Under salt stress it induces the expression of GAOX7, which encodes ad C20-GA inhibitor. |
| Alias | [DDF1][DWARF AND DELAYED FLOWERING 1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 1.41421 |
Ahg944463 | redox responsive transcription factor 1 |
| 1.41421 |
Ahg949754 | Integrase-type DNA-binding superfamily protein |
| 1.73205 |
Ahg485210 | cytochrome P450, family 94, subfamily B, polypeptide 3 |
| 2.44949 |
Ahg495276 | MATE efflux family protein |
| 2.82843 |
Ahg475045 | Integrase-type DNA-binding superfamily protein |
| 4 |
Ahg476823 | calmodulin-like 38 |
| 5 |
Ahg922473 | |
| 5.2915 |
Ahg472144 | Integrase-type DNA-binding superfamily protein |
| 7.4162 |
Ahg312784 | nudix hydrolase homolog 4 |
| 7.48331 |
Ahg915575 | cytochrome P450, family 707, subfamily A, polypeptide 3 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|