Detail



ID : Ahg944463

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|944463|scaffold_700692.1
Sequence
AAGAAGAAGG AATCGAGATT CGGGTATGCA TTATCCTAAC AACCGAACCG AATTCGTCGG AGCTCCAGCC CCAACCCGGT ATCAAAAGGA GCAGTTGTCA CCGGAGCAAG AGCTTTCAGT TCTAGTCTCC GCTTTGCAAC ACGTAATCTC AGGGGAAAAC GAAACGGCGC CGTATCAGGG GTTTTCCAGC GACAGCACAG TGATAAGCGC GGGAATGCCT CGGTTGGATT CAGACACTTG TCAAGTGTGT AGGATCGAAG GATGTCTCGG CTGCAACTAC TTTTTCGCGC CAAATCAGAG AATTGAAAAG AATCAACAGG AAGAAGAGAT TACTAGTAGT AGTAACAGTA GAAGAGAGAG CTCGCCTGTG GCGAAGAAAG CGGAAGGTGG CGGGAAAATC AGGAAGAGGA AGAACAAGAA GAATGGTTAC AGAGGAGTTA GGCAGAGACC TTGGGGAAAA TTTGCAGCTG AGATCAGAGA TCCTAAGAGA GCGACACGTG TTTGGCTTGG TACTTTCGAA ACCGCCGAGG ATGCGGCTCG AGCTTATGAT CGAGCTGCGA TTGGATTCCG TGGGCCACGG GCTAAACTCA ACTTCCCCTT TGTGGACTAC ACTTCTTCTG TTTCATCTCC TGTGGCTGTT GATGATATTG GAGCAAATGC TAGTGCAAGC GCGAGCGTGA GTGCCACGGA TTCTGTTGAA GCAGAGCAAT GGCCCGGAGG AGAAGGAGGG GATTGCAATA TGGAGGAGTG GATGAATATG ATGATGATGA TGGATTTTGG GAATGGAGAT TCTTCAGATT CAGGGAACAC TATTGCTGAT ATGTTCCAGT GATAGATAGA GCTCTTTCTT GT 
Length852
Protein Sequence
Protein Residue
Map Locationscaffold_7: 2622240.. 2622909
Download Sequence
A.thaliana
AGI-codeAT4G34410.1
Descriptionredox responsive transcription factor 1
TAIR curator summaryencodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.
Alias[RRTF1][redox responsive transcription factor 1]
Gene coexpression
MR
MR Locus Description
1 Ahg472144 Integrase-type DNA-binding superfamily protein
1.41421 Ahg471409 Integrase-type DNA-binding superfamily protein
2.44949 Ahg476631 Integrase-type DNA-binding superfamily protein
2.64575 Ahg912827 jasmonate-zim-domain protein 8
2.82843 Ahg312784 nudix hydrolase homolog 4
3.16228 Ahg476823 calmodulin-like 38
3.4641 Ahg949754 Integrase-type DNA-binding superfamily protein
4.69042 Ahg929526 COBRA-like protein 8 precursor
5.2915 Ahg495276 MATE efflux family protein
5.47723 Ahg485210 cytochrome P450, family 94, subfamily B, polypeptide 3
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression