Detail



ID : Ahg471422

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|471422|fgenesh2_kg.1__1376__AT1G12710.1
Sequence
CGAAGAAACC TCAAGAACGA GAAGTCTTGA AAGAAGCCTC TTGAGATTTT TGGATCTCGT TAAGGTTTAG ATGGGTGTGG CTCACTCTGA TCTTCACAAT GATTTGTCTT CTTCATCTTG TTTTGGGGAT CGGAATCTGT TGAAGCTTGG GTTAGGGGAT TTACCAGAGG CGTGTGTGGC TATGATTGTT GAGAATTTGG ATCCTGTTGA GATCTGTAGA TTCTCAAAGC TCAATAGAGC ATTTCGCGGC GCTTCTTGGG CTGATTGTGT GTGGGAATCG AAGCTTCCTC CGAATTACAG AGTTGTTCTC GAGAAAATCC TTGGTGGGTT CCCTGAAAAT TTGCAAAAAA GAGACCTTTA TGCTTGTCTC TGCAGGATTA ACTCATTCGA TGATGGCACC AAGAAGGTAT GGATTGATAA ACGAAGCAGT GGTGTTTGTC TATCCATTTC AGCTAAAGGA TTATCCATCA CAGGCATTGA TGATCGTAGA TATTGGAGTC ATATCCCCAC TGATGAATCT CGGTTTTCTT CTGTAGCTTA TCTCCAACAA ATTTGGTGGT TTGAAGTTGA TGGTGAAATC GATTTCCCAT TTCCGGTTGG AACCTACAGC ATTTTCTTCA GGCTTCAATT AGGCCGGCCT GGCAAGTGGT TTGGTCGACG GGTCTGTAAC ACCGAACAAG TCCATGGTTG GGACATTAAA CCGGTTCGAT TTCAACTCTG GACTGAAGAT GGTCAATATT CCTCATCTCA ATGTATGTTA ACTGAGCGGG GAAACTGGAT TCATTACCAC GCGGGAGACT TTATTGTCCG GGAATCGAAT AGGTCATCGA CAAAGATAAA ATTTTCGATG ACTCAGATCG ACTGTACCCA TACCAAAGGC GGGTTATCTC TAGACTCTGT AGTCGTGTAC CCGAGCTCGT GTAAAGGCCA GTTGAAGCGG TTTTAATGTT TCAATCGGAT CCGGTTTAGT GAGAGGTTAA AGGAGGTTTT TTCCTTGTAT AGATGTAGTT AGA 
Length1013
Protein Sequence
Protein Residue
Map Locationscaffold_1: 5020575.. 5022141
Download Sequence
A.thaliana
AGI-codeAT1G12710.1
Descriptionphloem protein 2-A12
TAIR curator summaryThis gene is predicted to encode a protein with a PP2 domain. This domain in present in lectins found in squash and cucumber, suggesting that this protein could potentially have carbohydrate binding capabilities.
Alias[AtPP2-A12][PP2-A12][phloem protein 2-A12]
Gene coexpression
MR
MR Locus Description
17.4356 Ahg485090 RING/U-box superfamily protein
18.1384 Ahg491275
19.1311 Ahg903839 Disease resistance protein (NBS-LRR class) family
25.3772 Ahg930812 SCARECROW-like 21
27.0555 Ahg472968 cyclin T 1;3
27.2213 Ahg475919 flavin-binding, kelch repeat, f box 1
31.305 Ahg481034 cold, circadian rhythm, and rna binding 2
36.0278 Ahg894730 transposable element gene
42.8602 Ahg312271
46.3033 Ahg470961 Major facilitator superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression