| Annotation |
|---|
| Description | jgi|Araly1|481034|fgenesh2_kg.4__94__AT2G21660.2 |
| Sequence |
TAGATCTTCT TCTCAAATTT CAATGGCGTC TGCAGATGTT GAGTACCGGT GCTTCGTTGG AGGTCTAGCT TGGGCCACTG ATGACAGAGC TCTTGAAACT GCCTTCTCTC AATACGGCGA CGTTGTTGAT TCCAAGATCA TTAACGATCG TGAGACTGGA AGATCAAGGG GATTCGGATT CGTCACCTTC AAGGATGAGA AATCCATGAA GGATGCGATT GAAGGAATGA ACGGACAAGA GCTCGATGGA CGTAGCATCA CTGTTAACGA GGCTCAGTCA CGAGGAAGCG GCGGCGGAGG CGGCGGCCGT GGAGGTGGTA GCTACGGAGG TGGCGGCGGC GGTAGACGTG AGGGAGGAGG TGGATACAGC GGTGGTGGAG GTTACTCGTC AAGAGGAGGT GGTGGTGGCG GAAGCTACGG TGGTGGAAGA CGTGAAGGTG GAGGAGGATA CGGCGGTAGT GAAGGAGGGG GTTACGGAGG AAGCGGTGGA GGAGGATGGT AATTCCTTTA ATTAGATTTG GGATTATCAA TGAATGTTCT CTCTCTCTAT GTGTTCTCTG TTTGGTTTGG TTCTGCTTTA GATTTGATGT AACAGTTCGT GATTAGGTAT TTTGGTATCT GGAAACGTAA TGTTAAGTCA CTTGTCATTC TCTAAATAAC AATTTTCTTC G |
| Length | 671 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_4: 408233.. 409289 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT2G21660.1 |
| Description | cold, circadian rhythm, and rna binding 2 |
| TAIR curator summary | Encodes a small glycine-rich RNA binding protein that is part of a negative-feedback loop through which AtGRP7 regulates the circadian oscillations of its own transcript. Gene expression is induced by cold. GRP7 appears to promote stomatal opening and reduce tolerance under salt and dehydration stress conditions, but, promotes stomatal closing and thereby increases stress tolerance under conditions of cold tolerance. Loss of function mutations have increased susceptibility to pathogens suggesting a role in mediating innate immune response. Mutants are also late flowering in a non-photoperiodic manner and are responsive to vernalization suggesting an interaction with the autonomous flowering pathway. There is a reduction of mRNA export from the nucleus in grp7 mutants. GRP7:GFP fusion proteins can be found in the cytosol and nucleus. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase). |
| Alias | [ATGRP7][CCR2][GR-RBP7][GRP7][GLYCINE RICH PROTEIN 7]["cold, circadian rhythm, and rna binding 2"][GLYCINE-RICH RNA-BINDING PROTEIN 7] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 1.41421 |
Ahg496297 | CCT motif -containing response regulator protein |
| 1.73205 |
Ahg928610 | metallothionein 2A |
| 2 |
Ahg484447 | CCR-like |
| 2 |
Ahg475919 | flavin-binding, kelch repeat, f box 1 |
| 2.23607 |
Ahg942557 | isoamylase 3 |
| 4 |
Ahg471553 | |
| 4.24264 |
Ahg918912 | secretion-associated RAS super family 2 |
| 4.58258 |
Ahg482064 | 16:0delta9 desaturase 2 |
| 4.69042 |
Ahg945400 | Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein |
| 4.79583 |
Ahg486603 | Remorin family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
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| The four seasons |
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| Growth Chamber expression |
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