Detail



ID : Ahg471472

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|471472|fgenesh2_kg.1__1426__AT1G13190.1
Sequence
TCTATCGGAT AAGAAAGAAG AACATCTCGA GTCTCGACGA ATACGACTCT CTCTTCCTCC GATCTCATCA CAACTCTTTC GTTGAAGCTC TGATTCTAAT TCCGGAGCTT GTGGGAATCT CAACGGAGAA GGCGGCGAAG CAACAAGAAG TCAAATGGCC AGTTTGTATA AATTCAATGA CTGAAGAAAA CGACTATGGA GGTAATCAGA AGATACTACA TCAAGGAAGT GGAACTATAC CTGCGCTAGC GGATGAAGAA CTTATGGGAG ACGATGATGA GTACGATGAT CTGTATAGCG ATGTTAATGT TGGTGAGAGT TTCTTCCAAG CTCATAATCA GCCTCAACCA CCAGCTCAGG TCGGTGGTAC GGGTAATGCA AGTCTTCAAG CTCAGACTAG TCATGTTGCT GCTGAACCGA GAATGGGAAT TGTATCTGGA GGTACGGTTG AAGGGAAGTA TCGAAACGAT GGGGGGCATA ATGGAACCAG TGGACCAGAC ACAAGATCAG ATGTTTATCC ACAAGCTTCT TCTTTTGGAG GAAAAGGGTT GAATATTGAT ATCCAATCCA ACAAAATCGG GCAACAAGGA TCAACATCTG TTGTGTTAAA CAACCATGGT TTTTCAGGGA ATGCTGTAAA TGTGCCTGAG CTGCCTGTGC ATAACCCCTA TGGTGCTCCG CCTCAAGGTG CTCAGCAGAT TCCTGTTAGC CAGATGAGTG TGAATCCAAA TGTAATGATG AACAAAAGCC CTACGCAGCC ATTCGTTGTG GACAATGGAA ACACCATGCT TTTTGTTGGA GAGTTACACT GGTGGACGAC GGATGCAGAG ATTGAGAGTG TTCTTTCTCA GTATGGAAGA GTCAAAGAGA TCAAGTTTTT CGACGAGAGA GTTAGTGGCA AATCTAAAGG GTATTGTCAG GTTGAATTCT ACGATTCAGC TGCTGCAGCC TCTTGCAAAG AAGGAATGAA TGGTTACATT TTCAACGGTA AAGCATGTGT TGTAGCCTTT GCTTCTCCTG AAACACTGAA GCAGATGGGA GCTAATTTCA CAGGGAGGAA CCAAGGACAA AACCAAATTC AAAACAGAAG GCCTCTGAAT GAAGGAATGG GAAGAGGTAA CAACAACAAC AACATGAATA CGCAAAATGG AGAAGGTGGA AGAAATTATG GTAGAGGTGG GTTTGCACGT GGTGGCCAAG GAATGAGCAA CCGTGGAGGT CCTTGGGGTG GTGGAATGAG AGGTAGAGGG CCAAACAACA TGGCTAGTGG TTCTGCTACT GGGCCGTATG GGCCTGGACT AGCTGGTCCT GCATTTGGTG GTATGATGCA TCCACAGGGT ATGATGGGAG CTGGTGGGTT TGATCCAACA TTCATGGGTC GGGGTGGTGG TTATGGAGGG TATTCAGGTA TTGCCTACCC TGGGATGCCT CATTCTTATC CAGGTGTTAA TGCAATGGGA ATGGTTGGGA TTGCTCCTCA TGTCAATCCA GCCTTTTTTG GCACGGGAAT GGGAACAATG GGTAGCTCGG GGATGAATGG AGTTCATGCA GCAGCGATGT GGAGCGAAGC TAATGGAGGT GGTGGTGAAG AGGGTGGTTC TGAATATGGT GGGTATGAAG ATGAAACCCA AGAGAAAGAA GAAAAGCCAT CACGAGATAA AGAACGGGCT ACCGCGGAAC GTGACTGGTC CGAGAACAGT GGTGACAGAA GACACAAGAG TCACCGTGAA GAAAAAGATA GTCACCGTGA GTATAAGCAG CAGAGAGACC GTGATTCTGA TGAGTTCGAT AGAGGACAAT CTAGCTTGAA ATCTCGAAGC AGATCAAGAA TGTCAGAAGA TGATCATAGG TCCAGGTCAA GAGATGCAGA CTATGGAAAG AGGAGACGAG GTGACTGAGA AAGAACCTCT AATGTTCTTC GTCTCTCTCT TGCTGCATCT AAACGATGAC ATTTTTAAGT TACTCTTCCT ACTAAATCTA TCTCTTTAGT CTTTATTATC AAATATTGGA TACAATGTTT CTCTATACTT TATTTACTGG TAGTCAGTCT TTGGAGACGA GCATATATTT GTAAACTATG TTTTGTTTTA TTGATGGTTC TACATTTGTT ATTGTGAATC ATTATAGCTT CAAGAATGTC GTTTGGTTAA GAGGAAA 
Length2157
Protein Sequence
Protein Residue
Map Locationscaffold_1: 5225725.. 5228382
Download Sequence
A.thaliana
AGI-codeAT1G13190.1
DescriptionRNA-binding (RRM/RBD/RNP motifs) family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
2.64575 Ahg938101 Duplicated homeodomain-like superfamily protein
4.89898 Ahg492376 homeobox protein 22
7.74597 Ahg472531 Vacuolar sorting protein 39
7.74597 Ahg898458 Cleavage and polyadenylation specificity factor (CPSF) A subunit protein
8.60233 Ahg480549 multimeric translocon complex in the outer envelope membrane 132
9.21954 Ahg484006 Tudor/PWWP/MBT domain-containing protein
11.5326 Ahg491942 Protein of unknown function (DUF1421)
13.0384 Ahg482689
13.7477 Ahg490469 Ubiquitin-like superfamily protein
19.4422 Ahg490258 Galactose oxidase/kelch repeat superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression