Detail



ID : Ahg471708

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|471708|fgenesh2_kg.1__1662__AT1G15170.1
Sequence
TCTCTCTCTA TCTCTCTGCA TTTAGCCATG GGAGACGCAG AGAGCACCAC CACTAAGGAT AGCTTGCTGC TGCCGGTAGA GAGGGTCGAG AACGTGACAT GGAGAGATCT GCGAGATGGT TCATTCACCG TAGAACTCAA GAGGCTTATC TGCTTCGCCG CTCCTATGGC GGCTGTGGTC ATCGCTCAGT TCATGTTACA GATCGTTTCA ATGATGATGG TTGGTCACCT CGGCAATCTC TCCCTCGCTA GTGCCTCTCT CGCCTCCTCT TTCTGCAACG TCACTGGCTT CAGCTTCATT ATAGGACTGT CATGTGCCTT AGATACTTTG AGCGGTCAAG CTTATGGAGC TAAGCTCTAT CGGAAACTAG GAGTTCAGAC TTACACAGCA ATGTTCTGTC TTGCATTAGT GTGTCTCCCT CTTTCTCTCA TTTGGTTCAA CATGGAAAAG CTTCTTTTGA TCCTTGGCCA AGACCCTTCT ATTGCACACG AAGCCGGAAG ATATGCTACC TGGCTTATCC CAGGACTGTT TGCTTACGCT GTTCTACAGC CTCTCACTCG CTACTTTCAA AACCAGAGCT TGATCACACC TCTACTCATC ACCTCTTGTG TTGTGTTCTG TATCCACGTT CCTGTCTGCT GGCTTTTAGT TTACAATTCA GGGCTTGGTA ATCTTGGAGG AGCCTTGGCT ATCAGTTTAT CAAACTGGCT CTATGCCATT TTCCTTGGAT CTTTCATGTA CTACTCCTCT GCCTGTTCTG AGACACGCGC CCCGCTCTCC ATGGAGATAT TCGACGGCAT TGGAGAGTTC TTCAAATATG CTCTTCCTTC TGCGGCTATG ATTTGCCTAG AGTGGTGGTC ATACGAACTC ATAATATTAC TCTCTGGTCT CTTACCCAAC CCACAACTGG AGACTTCTGT GCTCTCTGTC TGTCTCCAAA CAATTTCGAC AATGTATTCG ATACCACTAG CGATCGCAGC TGCAGCAAGC ACAAGAATCT CAAATGAGTT AGGTGCTGGA AACTCTCGAG CAGCACATAT CGTGGTCTAT GCGGCAATGT CTCTTGCAGT TATTGATGCA TTGATAGTGA GTATGTCTCT ATTAGTCGGC AGGAATCTTT TCGGGCACAT TTTCAGCAGT GACAAGGAAA CTATCGACTA TGTTGCAAAG ATGGCTCCAT TGGTCTCTAT TTCTCTCATG CTAGATGCTT TACAAGGGGT TCTCTCAGGT ATTGCAAGGG GATGCGGATG GCAACATATA GGAGCTTACA TAAACTTAGG AGCTTTCTAT CTCTGGGGGA TACCCATTGC TGCATCTTTA GCCTTTTGGA TTCATCTGAA AGGTGTTGGC CTTTGGATCG GAATCCAAGC CGGTGCCGTT CTGCAAACGC TTCTGCTTGC TCTTGTCACG GGCTGCACAA ACTGGGAAAA CCAGGCCAAT GAAGCGAGGA AGCGAATGGA TTTGGCCTAT GGAACGTAAA GCGTTGCAGA ACAGCACTTA CCGAGTCAGA AGGGACCATA TGTTCCTCCG GTTTAACCCT GTTGTTAGCA GTCAAATTGC TGTACTGTAT GTTACTTTTG GACTAGTGGT AGCCGCTAAT AATAGGGCAT GGTTATCCAA AAAGAGCCTT TTCTGTGTTC TCAATAACAA AGAATAATGA TTAGATTCAC TG 
Length1672
Protein Sequence
Protein Residue
Map Locationscaffold_1: 6129814.. 6132151
Download Sequence
A.thaliana
AGI-codeAT1G15170.1
DescriptionMATE efflux family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
4.24264 Ahg470709 Peptidase S24/S26A/S26B/S26C family protein
7.61577 Ahg471678 Plant invertase/pectin methylesterase inhibitor superfamily protein
13.0384 Ahg486596 Thioesterase superfamily protein
13.2288 Ahg484876 arogenate dehydratase 4
17.7482 Ahg332615 Copine (Calcium-dependent phospholipid-binding protein) family
19.2354 Ahg486888 saposin B domain-containing protein
20.347 Ahg486184
20.4939 Ahg490828 LisH/CRA/RING-U-box domains-containing protein
22.8473 Ahg944970 P450 reductase 2
23.4307 Ahg475001 hydroxyproline-rich glycoprotein family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression