Detail



ID : Ahg490828

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|490828|fgenesh2_kg.7__261__AT4G37880.1
Sequence
ATAATCTGAA GGAGTGATGA GAAAATAAGA ACACGAAAAC CAAAAAAAAA AAGACAGAAG AAAATCACGA AATCTGGTTC GAAGCCAAGT CTGTGTTTTA CTTTGATCCA CGAAACTTCA TCTTCTACCT CTCGATCTCA GGTACGATTT TCCTTAGAGT GATTTTTGAC TATCTAAGAA TGGAGCTAAA GAGCATTAAG GATGCGTTTG ATCGTGTTGC GACCAAGCAG AAGCTTTCTT ATAGCAAAAC AAATGAGATT GTTCAATTAC TGTCTCAAGA AATCGACAAG GCTTTGAGTA TATTACAGAA GACACCATCA TCAGATACTC TGCTTGATCA TAGATCTATC CTTGCTGATG TGAAGAAAGT GTTTATGGAG ATTGCTCCTA TCACTCAACT TGAAGCTGCT GAGAAAGAAC TACATGCGGC TTTGACCAAG TACCCTAAAG TTTTGGAGAA ACAGCTGAAT CCAGACATAT CAAAGGCTTA CAGAAACAAT GTCGAGTTCG ATACTCATAT CGTTAACCAG ATTATCGCCA ACTTTTTCTA CCGGCAAGGA ATGTTTGACA TTGGTGACTG TTTCGTTACT GAAACTGGTG AATCAGAATG TTCCACTAGA CAATCTTTTG TGGAAATGTA TCGGATACTA GAAGCTATGA AGAGACGTGA TCTTGAACCA GCTCTTAATT GGGCAGTTTT GAACTCAGAC AAACTAAAGC AAGCAAGGTC TGATCTTGAG ATGAAGCTTC ACAGTCTACA CTTCCTGGAA ATAGCGCAAG GCAAAAACTC CAAAGAAGCT ATCAACTACG CGAGAAAACA TATTGCCACG TTTGCAGATA GCTGCCTCCC GGAAATCCAG AAGCTCATGT GTTCACTCTT ATGGAACAGA AAACTCGATA GATCACCGTA CTCCGAGTTT CTCTCTCCCG CTCTGTGGAA CAATGCAGTC AAAGAGCTAA CCCGACAGTA CTGCAACCTA CTCGGTGAAT CATCTGAAAG CCCGTTGAGT ATAACAGTAA CAGCGGGTAC ACAAGCGTTA CCAGTACTAC TGAAATACAT GAACGTGATG GCGAACAAGA AGCTTGACTG GCAGACCATG GAACAACTTC CTGTCGATGC GCAACTATCA GAGGAGTTTC AGTTCCATTC AGTGTTTGTC TGTCCAGTCT CTAAAGAACA GTCAAGTGAC GACAACCCTC CAATGATGAT GTCTTGTGGA CATGTGCTTT GCAAGCAGAC GATCAACAAA ATGTCAAAGA ATGGCTCTAA GTCGTCTTTC AAGTGTCCGT ATTGCCCAAC CGATGTAGAC ATCTCGAGGT GTAGGCAGTT ACACTTTTGA AACGAAAGCT CGGAAAAAAC GAATGACCGG TATAAACTGG AACTAAGTTC TGAATCGGTG AAATCTGTGT CAAAATGTAA CCTTGTGGTG TTCTCTGTTT TTTTTTCATG AAGTTTTTTA AAAGATGAAG CTTTTGTGTA CAAATTGATC AGGGGAAGTT TTTAGATGAT TTATTGGACA TCCCATAAGA ATGTGTTTTT GGTGTTGTTG CTCTTTGTTT GTTAAACTTT CTGAATATAG 
Length1580
Protein Sequence
Protein Residue
Map Locationscaffold_7: 980831.. 982752
Download Sequence
A.thaliana
AGI-codeAT4G37880.1
DescriptionLisH/CRA/RING-U-box domains-containing protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
5.74456 Ahg484812 Leucine-rich repeat (LRR) family protein
9 Ahg481513 Protein of unknown function (DUF1645)
12.8841 Ahg470210 S-adenosylmethionine synthetase 1
13.4164 Ahg931690 PHD finger family protein / SWIB complex BAF60b domain-containing protein / GYF domain-containing protein
14.4914 Ahg471219 15-cis-zeta-carotene isomerase
16.2481 Ahg485566 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein
17.4356 Ahg492274 SEUSS-like 1
20.4939 Ahg471708 MATE efflux family protein
23.6432 Ahg935710 myb-like transcription factor family protein
26.2679 Ahg481375 response regulator 12
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression