Detail



ID : Ahg471892

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|471892|fgenesh2_kg.1__1846__AT1G16900.1
Sequence
TTTTCTTCAT TGCTTCGTCG AGAAGAGAAT GAACACGACC TCCATTTTCG TACTGAAATC ATCTAAGCTC GATGGATCTA ACGACGACGC GTCAGAGGCG TCCACTTATA TCTGACTCTT CTTCTTCGTC TTCCACGAAA TCTTACTCGA AGACCGATAA GCCTGGCCGA CCTAACGGCA GGGATGCGGA GGATGGTGGT CTCCGGTGGT TCTTGCCGTT TATGGCGCTT TGTTATCTTC GTTACATGAG CGCGACTTCT AACATCATTC ATGACTGCGA TGAAGTGTTC AATTACTGGG AGCCTCTTCA TTATCTTCTC TACAAGTCCG GATTTCAGAC CTGGGAATAC AGTTCCAACT TTGCTCTTCG GTCGTACTTA TACATCCTTT TCCATGAATT GGCTGGACGG CCTGCTTCTT GGTGGTTCGG TGATGACAAG GTTAGAGTTT TCTATGCTGT GAGACTCTTT CTCGGACTGG TTTCTGCAGT TTCAGACACT GTCCTGGTTA TTGCGCTTTC CAGAAAGTAC GGCAAACGTC TTGCTACATA TGCAGTTGCG ATGCTCTGCT TAACCAGTGG CTGCTTCTTT GCTAGCACCA GTTTCCTCCC CAGTTCATTT TCTATGTACG CCATAAGCCT CTCATCTGGT TTATTACTTT TCGAGAAGTA TGCCATGGCT GTTGCAGTTT CGGTTGTCGG GGTGATTCTT GGCTGGCCAT TTTCTATCTT GGCCTTTTTA CCTGTTGTTA TTTACTCTCT GGTTAAGAGA TTCAAGCAAG CATTTATCTC TGGCGCTGTC ACTTCTCTTT TCCTCTTAGG AGTCTCACTA CTTGTGGATT ACTATTATTA TAAGAGATGG ACATCATCGG TTTTGAATCT CTTGATATAC AATGTGTTAG GGGGTGGAGA GAGCCATCTC TATGGGACTG AAGGAGCACT TTTTTATATA AGAAATGGAT TTAACAACTT CAACTTCTGT TTCATTTTGG CCATGTTGTT TGTCGCAATA TATCCTGTTA TCAGAAGAAA GTATGACCGT GGCCTGCTGG TTGTGATTTC GCCGATGTAT ATTTGGCTGG CATTCATGTC ACTTCAGCCC CACAAAGAAG AAAGGTTCCT TTATCCTATA TACCCTCTTA TATGTGTCTC TGCTTCTGCT GTTATTGAGA ACATCCCTGA GCTGTTCCGG GAAAAGTATA GCTCACGTGA AAGTCTTCTG GTGACAATAA CCAAATACAT GCGACCTGTG ATTCTTGGTT TTATCTTATG TGCTTCACAT TCTCGCACAT TTGCTCTTAT TAATGGCTAT TCCGCTCCCT TAGAGGTCTA CAAACTACTA GAGCACCATG ATGATGCAGG ACCAGGTTCT GTTCTATGTG TGGGAAGTGA ATGGCATCGA TACCCATCAT CGTTTTTTGT GCCTGACTAC ATCAGCGAAG TACGGTGGAT CGATGATGGA TTCCGCGGTC TTCTTCCATT CCCATTTAAC AGTACACTTG GAGGCACTGC AGCAGCACCT GCATACTTCA ACAACAAGAA CCAAGCATCT GAAGAACAAT ATTTAAAGAA CATCGAAACT TGTACATTCC TCATTGAGTT GCAGCTTAGC AGACCGTATC AATATCGAGG CAGCGACTTA TCTACGTGGG AGGCTATTGC GGTGTTGCCT TATTTGGACA GAGAGCTTTC GCCAGCTAAG TATAGATCGT TCTTCATCCC GTACATGTGG CAGGAGAAAA ACGTGTTTGG CAAATACGTA GCACTTAGAA GAGTCCCAAA ATGATCACAA ATCCTTAAGA CTCTCTAGAC TTGTAGCTTT AACTCAGTTC ATTGGGCAGT TTTGAGCGGA ATGTAATAAC TAATAACTGA TTAGTATCGG CTTTTAAGTT CACGTTCACG GTTCGTAGTG GTAAAGTCGT TAAAGAGACT AGTTTTGACT TTGTAAGAAA TCTCCAAATG GCAACTGGTC AGAAGAACGT GAAAGATTAT GTTGATGACA TTATTGTGCA AAGTCT 
Length2016
Protein Sequence
Protein Residue
Map Locationscaffold_1: 6738833.. 6742212
Download Sequence
A.thaliana
AGI-codeAT1G16900.1
DescriptionAlg9-like mannosyltransferase family
TAIR curator summarycurculin-like (mannose-binding) lectin family protein, very low similarity to Ser Thr protein kinase GI:2598067 from (Zea mays); contains Pfam lectin (probable mannose binding) domain PF01453 but not the protein kinase domain of the Z. mays protein
Alias[EBS3][EMS-mutagenized bri1 suppressor 3]
Gene coexpression
MR
MR Locus Description
11.7473 Ahg909175 Transcription initiation factor IIF, beta subunit
16.9706 Ahg920552 Tetratricopeptide repeat (TPR)-like superfamily protein
17.4356 Ahg472799 Phosphoribulokinase / Uridine kinase family
20.0499 Ahg903252 FtsH extracellular protease family
20.6882 Ahg470078 SEC7-like guanine nucleotide exchange family protein
22.1811 Ahg325603 Translation elongation factor EF1A/initiation factor IF2gamma family protein
25.8844 Ahg485463
26.4575 Ahg485819 GRAS family transcription factor
28.7054 Ahg477059 vacuolar H+-pyrophosphatase 2
32.6497 Ahg491404
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression