Detail



ID : Ahg471969

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|471969|fgenesh2_kg.1__1923__AT1G17600.1
Sequence
ATGGCGTCCT CCTCTGCACC TCGTGTATCG AAGTACGACG TCTTCCTCAG CTTCCGAGGA GAAGACACCC GAAAAACAAT CGTTAGTCAT TTATACGCAG CACTTGATAG CAGAGGAATT GTTACTTTCA AAGACGACCA AAGGCTTGAG ATAGGAGATC ACATTTCTGA TGAACTCCGC AGAGCACTAG GGAGTTCGAG TTTCGCTGTT GTGGTTCTCT CCGAGAACTA CGCTACTTCC AGGTGGTGCT TATTGGAACT TCAACTGATA ATGGAGCTTA TGAAAGAGGG AAGACTTGAA GTATTTCCCA TCTTCTATGG AGTAGATCCT TCCGTGGTGA GGCATCAGCT AGGAAGTTTC GCTTTAGAAA AGTATCAAGG TCCTGAAATG GCGGATAAGG TTCTCAGGTG GAGAGAAGCT CTTAACCTAA TCGCCAATCT TTCAGGCGTG GTTTCAAGCC ACTGCGTTGA TGAGGCTATA ATGGTTGGAG AAATTGCCAG AGATATTTCA AGACGTGTGA CATTGTTGCA TAAAATAGAC TCTGGCAATA TTGTTGGGAT GAAAGCTCAC ATGGAAGGTC TTAATCATCG CTTGGATCTG GAATCCAATG AGGTTCTCAT GGTAGGAATC TGGGGAATGG GAGGAATTGG GAAAACCTCC ATTGCTAAGT GTCTCTATGA CCAGCTTTCA CCTAAATTTC CAGCTCATTG TTTCACAGAA AACATTAAGA GTGTTAGTAA AGATATTGGC CATGATCTAA AGCGTTTGCA AAAAGAAATG CTCTGCAATA TCCTCTGTGA TGATATTAGG TTATGGAGCG TGGAAGCTGG ATGCCAAGAG ATAAAGAAGA GACTTGGGAA TCAGAGGGTT TTTCTTGTGC TTGACGGTGT GGATAAAGTG TCACAGGTGC ATGCTTTGGC AAAAGATAAA AACTGGTTTG GTCCTGGGAG CCGAATTATC ATAACTACTC GAGATATGGG CTTGCTCAAT ACCTGTGGAG TAGAAATCGT TTATGAGGTT AAGTGCTTGG ATGATAAGGA TGCCCTCCAC ATGTTTAAAC AGATTGCTTT TGAAGGAGGA CTTCCTCCTG ATAGTTTTGA GCAACTCTCA CTCCGAGCTT CTCGGCTTGC TCACGGGCTT CCTTCTGCCA TTCAAGCTTA TGCCTTATTT CTCCGTGGAA GGACCGCGAC TCCTGATGGG TGGGAAGAAG CATTGAGTGC ACTTGAAAGC AGTCTTGACG AGAATATAAT GGAAATCTTG AAAATCAGCT ACGAGGGCTT ACCAAAACCA CATCAGAATG TATTCCTTCA TGTTGTCTGT CTCTTCAATG GAGACACTCT CCAGCGTATC ACTTCCCTTC TTCATGGCCC CATACCTCAG AGTAGCCTGT GGATAAGAGT TTTAGCAGAG AAATCTCTCA TCAAAATATC AACTAATGGA TCTGTAATCA TGCACAAGTT GGTAGAACAA ATGGGTAGAG AAATTATCCG CGACAATATG TCTTTGGCTC GAAAATTCCT CAGGGATCCT ATGGAAATTC GTGATGCCTT GGCTTTCAGA GACGCAGGAG AACAAACTGA ATGCATGTGC CTACACACGT GTGAGTTGAC CTGTGTGTTG TCCATGGAGG CCAGTGTTGT TGGCCGTATG CATAATCTCA AGTTTCTCAA GGTTTACAAG CATGTAGATT ACAGAGAGTC GAAGCTGCAA CTCATTCCAG ACCAACAGTT CCTGCCTCGT AGCCTACGGC TATTCCATTG GGATGCATTT CCATTGAGAG CCCTGCCTTC CGGCTCTGAT CCATGTTTTC TTGTTGAACT CAATCTGCGT CACAGTGATT TAGAAACTCT CAGGACTTGT ATGTTGAAGA GTTTGAAGAG ACTAGATGTG ACGGGATCTA AGTATCTCAA GCAACTTCCA GATCTTTCAA GTATCACGAG TCTTGAGGAA TTGCTTCTGG AACAATGCAC GAGACTGGAT GGCATTCCAG AGTGTATTGG AAAAAGGTCT ACCCTAAAGA AGCTTAAGCT ATCCTACCGT GGTGGGCGTA CTGCGCAGCA ACATATTGGA TTGGAGTTCC CAGACGCAAA AGTGAAAATG GATGCACTTA TAAACATATC GATTGGTGGA GACATAAGTT TTGAGTTTTG CTCAAAATTT AGAGGATATG CTGAATACGT CTCTTTCAAT TCTGAGCAAC AGATACCTGT TATATCGACG ATGATTCTGC AACAAGCACC TTGGGTCATC TCAGAGTGCA ATAGATTCAA TTCCCTCAGC ATCATGAGGT TCAGCCACAA AGAAAACGGT GAATCTTTCT CCTTTGACAT CTTTCCAGAT TTTCCCGACC TGAAAGAGCT TAAACTAGTG AACTTAAACA TCCGGAGAAT CCCATCTGGG ATTTGTCACT TGGAGTTACT AGAGAAGCTG GACCTCAGCG GAAATGATTT TGAGAACTTA CCAGAAGCTA TGAACAGCCT TTCCCGGCTG AAAACTCTCT GGCTTCGAAA CTGCTTCAAA CTCGAGGAGT TGCCAAAGCT AACTCAGGTG CAGACACTGA CACTTACCAA CTTCAAGATG AGGGAAGATA CTGTTTGCTT GAGCTTTGCC TTGAAAACTG CAAGAGTGTT GAATCATTGT CAGATCAGCT TAGTCATGAG CAGCCATGAT TTTGAGACAT TGCCACCAAG CATCAGAGAT CTTACCTCAT TGGTAACACT TTGCCTTAAT AACTGCAAGA AACTCAAATC AGTGGAAAGA ATCCCCACGT CTCTCCAATT TCTGGATGCA CACGGCTGTG ATTCCCTCGA AGCTGGTTGT GTAGAACATT TTAAGGACAT ACCAAACAAA GAGGTGTATA CTTGGATCTT GATCTGTCTC TTCTATGATT GA 
Length2892
Protein Sequence
Protein Residue
Map Locationscaffold_1: 7038446.. 7041768
Download Sequence
A.thaliana
AGI-codeAT1G17600.1
DescriptionDisease resistance protein (TIR-NBS-LRR class) family
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
1 Ahg471970 Disease resistance protein (TIR-NBS class)
4.58258 Ahg480202 Histone superfamily protein
8.48528 Ahg311464 Cysteine proteinases superfamily protein
10.7703 Ahg470343 Cystatin/monellin superfamily protein
11.1803 Ahg336756
11.6189 Ahg319227 valyl-tRNA synthetase / valine--tRNA ligase (VALRS)
18.1659 Ahg313733 VACUOLAR SORTING RECEPTOR 6
26.7208 Ahg359775 TraB family protein
28.8444 Ahg949869 calcium-transporting ATPase, putative
29.3939 Ahg929239 glucan synthase-like 4
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression