| Annotation |
|---|
| Description | jgi|Araly1|313733|fgenesh1_pm.C_scaffold_1002513 |
| Sequence |
ATGACTTTGA TTCATAAAGG AGCCATCTTG GCTCTGTTTC TAGCGTTGAC TATGGTGGTC AACGGAGTTT TCGGGAGATT CATCGTGGAG AAGAGTAGCG TCACGATTCT AAACCCTTTG GCAATGCGGT CTAAACACGA TGCAGCCATT GCTAACTTCG GTGTTCCTAA TTACGGTGGT TACATGATCG GTTCCGTTGT TTACGCTGGT CAAGGAGCTT ATGGATGTGA CTCTTTTGAT AAAACTTTCA AACCCAAATT CCCTCGTCCT ACCATTTTAA TCATCGATCG TGGAGAGTGC TACTTTGCAT TAAAGGTATG GAACGGTCAA CAATCCGGTG CAGCAGCAGT TTTAGTAGCT GATAACGTTG ATGAGCCATT GATAACTATG GATTCACCTG AGGAATCCAA AGAAGCTGAT GACTTTATAG AGAAACTCAA CATTCCTTCG GCTTTAATCG ACTTTTCTTT CGCCAATACA CTCAAGCAAG CTCTTAAAAA AGGCGAGGAA GTAGTCCTGA AGATAGACTG GAGTGAGTCA TTACCTCATC CGGATGAGAG AGTTGAGTAT GAGTTATGGA CTAACACGAA TGATGAGTGT GGTGCGCGGT GCGATGAGCA GATGAATTTT GTCAAGAACT TCAAAGGGCA TGCGCAGATT CTTGAAAAAG GAGGATACTC TTTGTTCACA CCTCATTACA TTACATGGTT TTGTCCTAAA GATTATGTTT CTAGCAATCA ATGTAAGTCT CAGTGTATCA ACCAAGGGAG GTATTGTGCT CCTGACCCTG AACAAGACTT TGGAGATGGA TACGATGGCA AAGACATCGT TTTCGAGAAT CTGAGACAGT TATGTGTTCA TAGAGTAGCA AAAGAGAATA ACCGGTCTTG GGTTTGGTGG GACTATGTGA CTGATTTTCA CATCAGGTGT TCAATGAAGG AGAAGAAGTA TAGCAAAGAA TGTGCTGAGA AAGTTGTTGA ATCTCTCGGT TTGCCACTTG ACAAGATCAA GAAATGCATT GGTGATCCTG AAGCTGATGT GGAGAATGAA GTTTTGAAAG CTGAGCAAGC GCTTCAGGTA GGACAAGGTG ACCGCGGGGA TGTCACAATC TTGCCAACAT TGATCGTCAA CAATGCTCAA TACCGCGGTA AACTCGAGAG AAATGCAGTA CTTAAGGCTA TATGTTCAGG ATTTAAGGAA AGAACTGAAC CGGGAATCTG TCTAAGTGGA GATATCGAAA CAAACGAATG TCTCGAAGCA AATGGAGGGT GTTGGCAGGA CATGAAGTCT AATGTAACAG CTTGCAAGGA CACATTTAGG GGAAGAGTCT GTGAATGCCC TGTTGTAAAT GGTGTGCAGT ATAAAGGAGA TGGCTATACC TCATGTGAAC CTTATGGCCC TGCCAGATGC TCGATTAATC AAGGAGGTTG CTGGTCTGAA ACCAAAAAGG GCTTAACTTT CTCCGCTTGC TCGAACTTGG AGACATCGGG ATGTCGCTGC CCTCCAGGGT TTAAAGGAGA TGGTCTTAAA TGTGAAGACA TTGATGAATG TAAGGAACAA TCAGCTTGTC AATGTGATGG ATGCAACTGT AAGAACAACT GGGGAGGCTT TGAATGCAAA TGCTCTGGAA ATCGTCTCTA CATGAAAGAA CAAGACACTT GTATTGAGAG AAGCGGATCA AGAATCGGAT GGTTCTTTAC GTTTGTGATT CTAGCTGCAG TTGCAAGCAT ATGTGTAGGT GGTTACGTAT TCTACAAGTA TCGTCTCAGG TCTTATATGG ATTCAGAAAT CATGGCGATT ATGTCTCAGT ACATGCCATT GGAGAGCCAA AACACAACCG ATCCAATGAC CGGTGAATCT CAACAGCAAC AGCTGAGATT AACTTCTGCA GCTTAA |
| Length | 1896 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_1: 13299132.. 13302536 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G30900.1 |
| Description | VACUOLAR SORTING RECEPTOR 6 |
| TAIR curator summary | |
| Alias | [BP80-3;3][VSR3;3][VSR6][binding protein of 80 kDa 3;3][VACUOLAR SORTING RECEPTOR 3;3][VACUOLAR SORTING RECEPTOR 6] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 4.24264 |
Ahg921440 | |
| 6.9282 |
Ahg346169 | chitinase, putative |
| 7.34847 |
Ahg943574 | Chitinase family protein |
| 13.6382 |
Ahg352125 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein |
| 15.0997 |
Ahg921441 | |
| 17.8885 |
Ahg934718 | Uncharacterised protein family (UPF0497) |
| 18.1659 |
Ahg471969 | Disease resistance protein (TIR-NBS-LRR class) family |
| 21.5639 |
Ahg490109 | calcium-dependent protein kinase 22 |
| 23.3666 |
Ahg480590 | NAC domain containing protein 36 |
| 25.7876 |
Ahg477682 | Disease resistance protein (TIR-NBS class) |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|