Detail



ID : Ahg472101

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|472101|fgenesh2_kg.1__2055__AT1G18750.1
Sequence
ATGGGTAGGG TTAAGTTGAA GATTAAAAGA CTTGAGAGCA CAAGCAACAG GCAAGTTACA TACACGAAGA GAAAAAATGG GATATTGAAG AAAGCCAAAG AGTTATCGAT TTTGTGTGAT ATTGATATTG TCCTTCTTAT GTTTTCTCCT ACCGGAAGGG CTACTGCTTT CCATGGAGAA CACAGTTGCA TTGAAGAGGT TATTTCCAAG TTTGCGCAAT TAACTCCACA AGAAAGGACA AAAAGGAAAC TGGAGAGCCT TGAAGCATTG AAGAAAACTT TTAAAAAACT GGATCATGAT GTAAATATAC ATGACTTTTT AGGAGCAAGG AATCAAACTA TTGAGGGTCT AAGTAACCAA GTAGCGATTT ACCAAGCTCA GCTAATGGAG TGTCATAGGA GGTTGAGTTG TTGGACGAAC ATCGATAGAA TAGAAAACAC TGAGCACCTC AATTTATTGG AAGAATCATT GAGGAAATCT ATTGAAAGAA TCCAGATTCA CAAGGAACAT TACAGAAAGA ACCAACTTTT GCCAATAGAA TGTGCAACAA CACAGTTTCA CAGCGGGATA CAGTTGCCTA TGGCGATGGG AGGTAATAGT AGTATGCAAG AAGCTCACTC GATGTCCTGG CTTCCTGATA ATGATAACCA GCAAACAATT TTACCTGGTG ATTCCAGTTT TCTTCCTCAT AGAGAGATGG ATGGTCCGAT TCCCGTTTAC TCAAGTTGCT TCTTTGAGTC TACAAAACCA GAAGATCAGA TATGCAGCAA CCCGGGACAA CAGTTTGAGC ACTTAGAACA ACAAGGAAAC GGTTGTTTGG GTTTACAACA GCTTGGAGAG GAATATTCAT ATCCTACACA ATTTGGTACT ACTTTGGGAA TGGAAGACGA TCAAGAGAAA AAGATAAAAT CTGAAATGGA ATTGAACAAC TTGCAACAAC AACAACAACA ACAACAACAA GATCCTTCAA TGTATGATCC CATGGCTAAT AATAATGGTG GCTGCTTTCA GATTCCTCAT GATCAGTCCA TGTTTGTCAA TGATCATCAT CATCATCATC ATCACCATCA TCAAAATTGG GTTCCAGATT CAATGTTTGG TCAGACTTCT TACAATCAGG TTTGTGTTTA CACCTCCATT GGAACTATGT AG 
Length1152
Protein Sequence
Protein Residue
Map Locationscaffold_1: 7535628.. 7537910
Download Sequence
A.thaliana
AGI-codeAT1G18750.1
DescriptionAGAMOUS-like 65
TAIR curator summaryEncodes a member of the MIKC (MADS box, Keratin binding domain, and C terminal domain containing )family of transcriptional regulators. AGL65 is expressed in pollen.It forms heterodimers with other MICK family members (AGL104). Involved in late stages of pollen development and pollen tube growth.
Alias[AGL65][AGAMOUS-like 65]
Gene coexpression
MR
MR Locus Description
17.3494 Ahg492923 Uncharacterised protein family (UPF0114)
36.2767 Ahg915254 Putative thiol-disulphide oxidoreductase DCC
40.3237 Ahg930269 Protein kinase superfamily protein
49.8397 Ahg318458 calmodulin binding;transcription regulators
54.111 Ahg473263 multidrug resistance-associated protein 1
57.4456 Ahg495319 SCARECROW-like 8
58.7367 Ahg482436 nuclear factor Y, subunit A4
73.4234 Ahg921070 PLATZ transcription factor family protein
74.3841 Ahg350377 Protein of unknown function (DUF1230)
76.9415 Ahg314675 Calcium-dependent lipid-binding (CaLB domain) family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression