Detail



ID : Ahg495319

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|495319|fgenesh2_kg.8__1135__AT5G52510.1
Sequence
TCTCTCTCTC TATTTCTCAG AGTATCTAAT TTCTCTCTTC TCTCTTTCCA TATTATCATG CGTTTCATTA TTTGGTAATT TTTTTCTTTC TGAGCTTTTG AGAGAATAAA AAATGGAATC TGGTTTCTCC GGCGGCGGTG GTGGGTCGGA TTTTCACGGT GGTGGTGGTA GATCTATACC TGGAGGTCCC GGAACTGTAA TCAACGTTGG TAATAATAAT CCTCAACCGA CGTATAGAAA CCAAATTCCT GGAATCTTCC TTGATCAGAT CGGAAACAGA GTCTCCGCCG GTAATGGATT CGCCGGGAAA CGTACTTTAG CAGATTTTCA AGCGGCTCAG CAATATCAAC AGCAACAGCA ACAGCAACAG CAACAACAAC AACCGTTTTA TAATCAAGCA GCTCTCAACG CTTTTCTTTT AAGGTCCGTG AAGCCTAGAA ATTATCAGAA TTTTCAATCT CCGTCGCCGA TGATCGATCT CACGTCGGTG AATGATATGA GTTTGTTTGG TGGTTCTGGT TCGTCTCAGC GTTACGGTTC ACCGGTTCTC AAGTCTCAGA CGCAGCAGCA TCAATCGAAT TTCGGTTTAT TTGGTGGGAT CCGAATGGGA TACGGGTCGA GTAATAATAA CAACATGACG TTAACCGGCG TTCCTTGTAT TGAACAGGTT CAGCATAACC GGGTTCATGA ATCGGAGAAC ATGTTGAATA GTTTAAGAGA GCTAGAGAAA CAGCTTTTAG ATGATGACGA TGAGAGTGGT GGTGATGATG ACGTGTCAGT TATCACAAAT TCAAATTCCG ATTGGATTCA AAATCTCGTG ACTCCGAACC CGAACCCGAA CCCGGTTTTG TCTTTTTCAC CGACTTCTTC TTCTTCGTCT TCTTCACTAT CTACAGCTTC GACGACGACA TCGGTATGTT CACGACAAAC GGTTATGGAA ATCGCGACGG CGATCGCGGA AGGGAAAACG GAGATAGCGA CGGAGATTTT GGCGCGTGTT TCTCAGTCGC CGAATCTTGA GAGGAGTTCA GAGGAGAAGC TGGTTGAGTT CATGGTGACG GCGCTACGAT CGCGGATTAA TCAGGCTGAG AGTCTAGCTT CTCCGGCGAC GGAATTGTAT CGGAAGGAGC ATTTAATCTC GACTCAATTG CTCAACGAGC TCTCTCCTTG TTACAAACTC GGTTTCACGG CGGCGAATCT CGCCATTCTC AACGCCGCCG GTAACAACGA CGCAGGGATG ATGATGTTGC ACGTTATCGA TTTCGATATC GGAGAAGGTG GACAATATGT TAACCTTCTC CAAACACTCT CCACGCGCCG GAATGGTAAG AATCAGAATC AGAATTCTCC GGTGGTTAAG ATCACAGCCG TGACGAACAA CGTCTACGGA TTTTTGGTCG ATGGCGGTGG AGAAGAGAGG TTGAAAGTCG TCGGAGATCT GTTGAGCCAA CTCGGTAATC GACTCGGTAT CTCCGTGAGT TTCAACGTGG TGGCGAGTTT ACGACTCGGT GATCTGAGTC GTGAATCGCT CGGGTGTGAT CCCGACGAGC CGTTGGCCGT GAACTTAGCT TTCAAGCTTT ATCGTGTTCC CGACGAAAGC GTATGCACAG AGAATCCGAG AGACGAGCTT CTCCGGCGCG TGAAGGGACT TAAGCCGCGC GTGGTGACTT TAGTGGAACA AGAAATGAAT TCTAATACGG CACCGTTTTT AGGGCGAGTG AGTGAGTCAT GCGCGTGTTA CGGTGCATTG CTTGACTCGG TCGAGTCGAC CGTTCCTAGT TTGAATTCGG ACCGCGTCAA GGTCGAGGAA GGAATTGGCC GGAAGCTAAT AAACGCGGTG GCGTGCGAAG GAATCGATCG GATTGAGCGG TGCGAGGTTT TCGGGAAATG GCGAATGCGG ATGAGCATGG CTGGGTTCGA GTTAATGCCA TTGAGTGAGA AGATAGCTGA CCGACTCAAT AACGGAAACC TAGCTCACCC GGGCTTTACC GTTAAAGAAG ATAACGGAGG TGTGTGCTTT GGTTGGATGG GACGGACACT CGCTGTCGCA TCCGCTTGGC GTTAATTTCG AGGATTATTC TGATAATATT ATCATTGTGA TTTTCCATTT CGAAAAGTGT AGGAATCTTA TGTAACAAAG AAAAAAAACT TTTATATTTT ACTAATAATA AAAGAAAGAA TGATTGGGTT 
Length2190
Protein Sequence
Protein Residue
Map Locationscaffold_8: 14253808.. 14256118
Download Sequence
A.thaliana
AGI-codeAT5G52510.1
DescriptionSCARECROW-like 8
TAIR curator summary
Alias[SCL8][SCARECROW-like 8]
Gene coexpression
MR
MR Locus Description
6.32456 Ahg495722 expansin A14
6.7082 Ahg470075
8.12404 Ahg327309 H(+)-ATPase 3
14.8997 Ahg919569 arogenate dehydratase 6
16.2481 Ahg934635 Ubiquitin-conjugating enzyme/RWD-like protein
17.8606 Ahg329088 OSBP(oxysterol binding protein)-related protein 4B
21.4009 Ahg928241 Ribosomal protein L34e superfamily protein
22.1359 Ahg350399 pentatricopeptide (PPR) repeat-containing protein
22.6274 Ahg938644 FAD-dependent oxidoreductase family protein
27.4955 Ahg481346 DnaJ/Hsp40 cysteine-rich domain superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression