| Annotation |
|---|
| Description | jgi|Araly1|472304|fgenesh2_kg.1__2258__AT1G20696.3 |
| Sequence |
CATCAGATAT TTTAACATCC CCCACTTAAC CCTCTCATCT CTCGGCCTCT CACTCGAATC TCCTTCACAA AGCGTACAAT TCACAAACAC CTTGTTATTC TCTCTTTACT CTCTCTCTAT TTCTCTCTCT TCAACCCCTA CGAAGATCTT CTTCTTCGTC TTGATCGATC ATGAAAGGAG GTAAATCCAA GACTGAAACC AGGAGCGCAA AGCTCTCTGT GACTAAGAAG CCTGCCAAGG GAGGCAAAGG TGCTGCTAAA GATCCAAACA AACCTAAGAG ACCTTCCAGT GCCTTCTTCG TTTTCATGGA AGATTTCCGT GAGACGTACA AGAAGGAGCA CCCCAAGAAC AAGTCTGTCG CTGCTGTTGG CAAAGCTGGT GGTGAAAAGT GGAAATCCTT GTCTGACTCT GAGAAGGCTC CTTATGTGGC TAAGGCGGAC AAGCGTAAGG TTGAGTATGA GAAGAACATG AAAGCCTACA ACAAGAAACT GGAGGAAGGT CCAAAGGAAG ATGAGGAATC TGACAAGTCA GTCTCAGAGG TGAACGATGA AGATGATGCT GAGGATGGGA GTGAAGAGGT AAGGGGTTGA GAAGACGATG ACTAAGAAGT TGAAGTTATG GTAGCATAAT ATAGAAGGCT GCAAGGAATC TCTCGGATGT TTTTTATCTC TTCTCTTAAA TTGTTCATTC GGCTGGTTAA AGTGGGTCTT TTTTTTTTTC TCTTTCTTTT TTACTGATGT TTCGTTTTAG TAAGCAATCA CCTATCTTCC CACTGATTCT ACGGGTAATG GAAAAAGTAT GTAGAATGTT TAGATGAATG AGAGATTTGC AGCTTTATAT AATGAATGAT TTAGCTTTTT A |
| Length | 861 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_1: 8459813.. 8461760 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G20696.2 |
| Description | high mobility group B3 |
| TAIR curator summary | Encodes a protein belonging to the subgroup of HMGB (high mobility group B) proteins that have a distinctive DNA-binding motif, the HMG-box domain. The motif confers non-sequence specific interaction with linear DNA and structure-specific binding to distorted DNA sites. The HMGB proteins are involved in the assembly of nucleoprotein complexes. Can be phosphorylated by CK2alpha. |
| Alias | [HMGB3][NFD03][NFD3][high mobility group B3] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 3.16228 |
Ahg925800 | calmodulin 4 |
| 6 |
Ahg495556 | Translation initiation factor SUI1 family protein |
| 6 |
Ahg945400 | Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein |
| 7.48331 |
Ahg938862 | multiprotein bridging factor 1B |
| 7.74597 |
Ahg916356 | Protein of unknown function (DUF567) |
| 9.16515 |
Ahg475473 | DSS1 homolog on chromosome V |
| 12.2474 |
Ahg921302 | gigantea protein (GI) |
| 13.4164 |
Ahg324745 | Protein of unknown function (DUF581) |
| 13.8564 |
Ahg477110 | aldehyde dehydrogenase 5F1 |
| 13.8564 |
Ahg923079 | Serine protease inhibitor (SERPIN) family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|